RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SNRNP25Q9BV90 132 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 UBA2Q9UBT2 640 aaPredicted RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CLUHO75153 1309 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 A0A1B0GW55 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 TBC1D12O60347 775 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RNASEH1O60930 286 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 UNC5CO95185 931 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 NEK3P51956 506 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 GRIK3Q13003 919 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ANKS6Q68DC2 871 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CYP2R1Q6VVX0 501 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 C16orf59Q7L2K0 433 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 C10orf53Q8N6V4 93 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ARRDC4Q8NCT1 418 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 C18orf25Q96B23 403 aaPredicted RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 PGLYRP2Q96PD5 576 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RNF157Q96PX1 679 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 WNT7AO00755 349 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ABCB1P08183 1280 aaPredicted RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CAPSQ13938 189 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 STARD3Q14849 445 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CYP4Z2PQ8N1L4 340 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RASGEF1CQ8N431 466 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM45AQ8TCE6 357 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 REPS1Q96D71 796 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 GEMIN8Q9NWZ8 242 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CCDC167Q9P0B6 97 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DUSP12Q9UNI6 340 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 PHGDHO43175 533 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 USP12O75317 370 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 IGSF6O95976 241 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 MYL4P12829 197 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 UGCGQ16739 394 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ATP13A4Q4VNC1 1196 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ARMCX4Q5H9R4 360 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ACTRT2Q8TDY3 377 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RSPH1Q8WYR4 309 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 SHC3Q92529 594 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ABHD16BQ9H3Z7 469 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 WDR41Q9HAD4 459 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 MIEF1Q9NQG6 463 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 MRC1P22897 1456 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 HS6ST1O60243 411 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 KCNH1O95259 989 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CAPZA2P47755 286 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 CRADDP78560 199 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 PDK4Q16654 411 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 GPC2Q8N158 579 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 PYDC1Q8WXC3 89 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 TPD52L3Q96J77 140 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC4A9Q96Q91 983 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 POLR1EQ9GZS1 481 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 VAV3Q9UKW4 847 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 TRIM24O15164 1050 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 CYP2A6P11509 494 aaPredicted RBP11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 AKR1A1P14550 325 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 NCF4Q15080 339 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 MARK4Q96L34 752 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 PRRG3Q9BZD7 231 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 ADAM30Q9UKF2 790 aa11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 MRPL42Q9Y6G3 142 aaKnown RBP11.08□□□□□ -0.63
SNRNP200-201ENST00000323853 MON2Q7Z3U7 1717 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SYNCRIPO60506 623 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SERPINI2O75830 405 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 COX4I1P13073 169 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PSMB9P28065 219 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 LRPAP1P30533 357 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 EVX2Q03828 476 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF398Q8TD17 642 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 RNF145Q96MT1 663 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF670Q9BS34 389 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 LIMD1Q9UGP4 676 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 FSCN2O14926 492 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 NPR3P17342 541 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 TAS2R40P59535 323 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 POLNQ7Z5Q5 900 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 MAGED4Q96JG8 741 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 YME1L1Q96TA2 773 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 BIRC5O15392 142 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ATG7O95352 703 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 290.2 ms