RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 NEU3Q9UQ49 428 aa16.15■□□□□ 0.18
SMARCD2-202ENST00000323347 ITM2AO43736 263 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 HADHAP40939 763 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 RPL10AP62906 217 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 RABGAP1LQ5R372 815 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 RFWD3Q6PCD5 774 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 TAC4Q86UU9 113 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 DCLK2Q8N568 766 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 TTC8Q8TAM2 541 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 ZNF669Q96BR6 464 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 ZNF570Q96NI8 536 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 AGO3Q9H9G7 860 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 DMAP1Q9NPF5 467 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 DNAJC28Q9NX36 388 aa16.14■□□□□ 0.17
SMARCD2-202ENST00000323347 ENTPD5O75356 428 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 CYBAP13498 195 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 NFKB1P19838 968 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 CCNCP24863 283 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 KHDC1Q4VXA5 237 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 ARTNQ5T4W7 220 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 CES3Q6UWW8 571 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 ZCCHC23Q6ZST2 131 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 METTL23Q86XA0 190 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 CCDC117Q8IWD4 279 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 PPP1R14CQ8TAE6 165 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 DQX1Q8TE96 717 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 HAPLN3Q96S86 360 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 SORT1Q99523 831 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 PAAF1Q9BRP4 392 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 KIFC1Q9BW19 673 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 BATF3Q9NR55 127 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 PLA2G4CQ9UP65 541 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 ZNF195O14628 629 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 INPPL1O15357 1258 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 TIMM44O43615 452 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 DNAJB1P25685 340 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 HUNKP57058 714 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 OLIG2Q13516 323 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 PRPSAP1Q14558 356 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 MAPRE1Q15691 268 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 BRMS1LQ5PSV4 323 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 FSTL4Q6MZW2 842 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 STRA8Q7Z7C7 330 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 LINC00523Q86TU6 105 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 C10orf107Q8IVU9 208 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 EDEM1Q92611 657 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 MCUR1Q96AQ8 359 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 UROC1Q96N76 676 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 AGAP3Q96P47 875 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 NSMCE4AQ9NXX6 385 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 DNAJC16Q9Y2G8 782 aa16.13■□□□□ 0.17
SMARCD2-202ENST00000323347 A0A0U1RQF3 1178 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CASTOR2A6NHX0 329 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 ARHGAP42A6NI28 874 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 B2RBV5 119 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 F8W8V4 182 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 USP12O75317 370 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 KLHL2O95198 593 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CPA3P15088 417 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 KCNA4P22459 653 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 INHBEP58166 350 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CDH17Q12864 832 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 DNAL1Q4LDG9 190 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CERCAMQ5T4B2 595 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 MANEALQ5VSG8 457 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 NAPEPLDQ6IQ20 393 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CXCL17Q6UXB2 119 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CTU1Q7Z7A3 348 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 CNTD1Q8N815 330 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 N4BP2L2Q92802 583 aaPredicted RBP16.12■□□□□ 0.17
SMARCD2-202ENST00000323347 SPECC1L-ADORA2AF8WAN1 911 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 IRAK2O43187 625 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 KITP10721 976 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 RALBP11234 206 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 TYMPP19971 482 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 ABCE1P61221 599 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 GRIK3Q13003 919 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 ACSBG2Q5FVE4 666 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 ARMC3Q5W041 872 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 ATG14Q6ZNE5 492 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 FCRL5Q96RD9 977 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 IL12RB2Q99665 862 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 EBF4Q9BQW3 602 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 RHOBTB2Q9BYZ6 727 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 TMLHEQ9NVH6 421 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 MARCOQ9UEW3 520 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 PADI3Q9ULW8 664 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 AAR2Q9Y312 384 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 PCDHB12Q9Y5F1 795 aa16.11■□□□□ 0.17
SMARCD2-202ENST00000323347 SNX10Q9Y5X0 201 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms