RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 FYNP06241 537 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 MBL2P11226 248 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 LCP1P13796 627 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 HDCP19113 662 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 DRD1P21728 446 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 HOXA6P31267 233 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 FNTAP49354 379 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 LAMB3Q13751 1172 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 CYP1B1Q16678 543 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 DDR2Q16832 855 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 TFDP3Q5H9I0 405 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 MS4A13Q5J8X5 152 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 OTUD1Q5VV17 481 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 TAF3Q5VWG9 929 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 ALG1LQ6GMV1 187 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 CC2D1AQ6P1N0 951 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 GPRIN1Q7Z2K8 1008 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 BMP8AQ7Z5Y6 402 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 PALB2Q86YC2 1186 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 ANKMY2Q8IV38 441 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 YAF2Q8IY57 180 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 AHI1Q8N157 1196 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 BBS5Q8N3I7 341 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 RTL3Q8N8U3 475 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 FIBINQ8TAL6 211 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 GPR152Q8TDT2 470 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM172AQ8WUF8 416 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 UCMAQ8WVF2 138 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 CPLX3Q8WVH0 158 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 RTP4Q96DX8 246 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 NAPGQ99747 312 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 CORO1BQ9BR76 489 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 C2orf49Q9BVC5 232 aaPredicted RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 FOXP3Q9BZS1 431 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 ZYG11BQ9C0D3 744 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 IRF2BPLQ9H1B7 796 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 KCNF1Q9H3M0 494 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 ST7Q9NRC1 585 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 ZFATQ9P243 1243 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 MTUS1Q9ULD2 1270 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 USP18Q9UMW8 372 aa3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 DRG1Q9Y295 367 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA6L10A0A0M3HER8 536 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CTAGE9A4FU28 777 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA6CA6NDK9 693 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 ARHGAP42A6NI28 874 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 ERI2A8K979 691 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CHURC1-FNTBB4DL54 471 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 M0QYT0 321 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CCL16O15467 120 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 DYRK3O43781 588 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GREM1O60565 184 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GHRHP01286 108 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 OR4Q2P0C623 313 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA6DP0CG33 693 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 HNRNPLP14866 589 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CA4P22748 312 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 PBX3P40426 434 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CACNA2D1P54289 1103 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 ARPP19P56211 112 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 HDAC4P56524 1084 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 RPL26P61254 145 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 ETF1P62495 437 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 MRPS21P82921 87 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC15Q0P6D6 951 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CCINQ13939 588 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 DPYSQ14117 519 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 RPS6KA1Q15418 735 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GLE1Q53GS7 698 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 INO80DQ53TQ3 878 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 FYB2Q5VWT5 728 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 BBS12Q6ZW61 710 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 PEX26Q7Z412 305 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TMCO2Q7Z6W1 182 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TREML1Q86YW5 311 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CDKL3Q8IVW4 592 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GJD3Q8N144 294 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 DCAF4L2Q8NA75 395 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 SPC24Q8NBT2 197 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 MNS1Q8NEH6 495 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 DTX3LQ8TDB6 740 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TTC17Q96AE7 1141 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 HDAC11Q96DB2 347 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC114Q96M63 670 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 KCNK16Q96T55 309 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 NACA2Q9H009 215 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TMEM30AQ9NV96 361 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 DDIT4Q9NX09 232 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA6AQ9NYA3 693 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 KIAA1522Q9P206 1035 aaPredicted RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TJP2Q9UDY2 1190 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 RASAL2Q9UJF2 1139 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 RPL26L1Q9UNX3 145 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 SORCS3Q9UPU3 1222 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TCF20Q9UGU0 1960 aaKnown RBP3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 HTTP42858 3142 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC163A0A0D9SF12 145 aa3.38□□□□□ -1.87
SCAMP1-201ENST00000320280 TARSL2A2RTX5 802 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms