RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PPEF2O14830 753 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SERPINF2P08697 491 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 OCA2Q04671 838 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 FASTKQ14296 549 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 RNF180Q86T96 592 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 CEP19Q96LK0 163 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 EXOSC4Q9NPD3 245 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 ST3GAL5Q9UNP4 418 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 MYO18AQ92614 2054 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SMIM28A0A1B0GU29 152 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SOAT2O75908 522 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 RHOCP08134 193 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 RHOAP61586 193 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 TAGAPQ8N103 731 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 PAPOLBQ9NRJ5 636 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 MYH6P13533 1939 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 STRNO43815 780 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 AMIGO2Q86SJ2 522 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 CIPCQ9C0C6 399 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 SCHIP1Q9P0W5 487 aaPredicted RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 AP3B1O00203 1094 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 CHADO15335 359 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 MT-CYBP00156 380 aaPredicted RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 PSMC3P17980 439 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 GRIA4P48058 902 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 RGS4P49798 205 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 OGDHQ02218 1023 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 ACAP1Q15027 740 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 SYTL3Q4VX76 610 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 PSTKQ8IV42 348 aaKnown RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.28
CLIP4-201ENST00000320081 MBOAT7Q96N66 472 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 KLHL4Q9C0H6 718 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 STXBP5LQ9Y2K9 1186 aa16.77■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF536O15090 1300 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 HEATR9A2RTY3 570 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 BTN3A1O00481 513 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 CILPO75339 1184 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 CCNB1P14635 433 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 TBCCQ15814 346 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 TPGS1Q6ZTW0 290 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 GPR142Q7Z601 462 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 ATAD1Q8NBU5 361 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 OR6Y1Q8NGX8 325 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 TMEM79Q9BSE2 394 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 SNX15Q9NRS6 342 aa16.77■□□□□ 0.27
CLIP4-201ENST00000320081 LSM7Q9UK45 103 aaKnown RBP16.77■□□□□ 0.27
CLIP4-201ENST00000320081 MRASO14807 208 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 CCNT2O60583 730 aaKnown RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 FBXO21O94952 628 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 CYBBP04839 570 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF460Q14592 562 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 PARP6Q2NL67 630 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ATP6AP1LQ52LC2 224 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TBCELQ5QJ74 424 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TTC23LQ6PF05 361 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TMEM161AQ9NX61 479 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF197O14709 1029 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 VPS26AO75436 327 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 USP2O75604 605 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 C2P06681 752 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ALADP13716 330 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ARL2P36404 184 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 NR2C2P49116 596 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 GID8Q9NWU2 228 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 CLIC5Q9NZA1 410 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TBKBP1A7MCY6 615 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 CLASP2O75122 1294 aaKnown RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF682O95780 498 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ALBP02768 609 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 MZF1P28698 734 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 RENBPP51606 427 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ABCE1P61221 599 aaKnown RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 RNASEH2BQ5TBB1 312 aaKnown RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 LPCAT4Q643R3 524 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 FNDC5Q8NAU1 212 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 DNAJB14Q8TBM8 379 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 SERAC1Q96JX3 654 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 MARCH2Q9P0N8 246 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 ATP4AP20648 1035 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 HOXD10P28358 340 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 IRX1P78414 480 aaPredicted RBP16.76■□□□□ 0.27
CLIP4-201ENST00000320081 TRAF2Q12933 501 aa16.76■□□□□ 0.27
CLIP4-201ENST00000320081 BOP1Q14137 746 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms