RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 TRIM16O95361 564 aa16.8■□□□□ 0.28
ITGA3-202ENST00000320031 HOXD13P35453 343 aa16.8■□□□□ 0.28
ITGA3-202ENST00000320031 HIST2H2ACQ16777 129 aaPredicted RBP16.8■□□□□ 0.28
ITGA3-202ENST00000320031 HIST2H2AA3Q6FI13 130 aa16.8■□□□□ 0.28
ITGA3-202ENST00000320031 CCDC149Q6ZUS6 474 aa16.8■□□□□ 0.28
ITGA3-202ENST00000320031 RNF217Q8TC41 542 aa16.8■□□□□ 0.28
ITGA3-202ENST00000320031 A0A087X1B8 175 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 VHLP40337 213 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 DLK2Q6UY11 383 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 FAM136AQ96C01 138 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 PLA2G4CQ9UP65 541 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 STARD13Q9Y3M8 1113 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 TCRBV7S2A1N4TA0A589 114 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 EXOC3L1Q86VI1 746 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 P2RY11Q96G91 374 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 PWWP2AQ96N64 755 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 C2orf49Q9BVC5 232 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 SPATA16Q9BXB7 569 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 NFKBIZQ9BYH8 718 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 CDHR5Q9HBB8 845 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 TXNRD2Q9NNW7 524 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 NCF1BA6NI72 391 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 NCF1CA8MVU1 366 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 E9PBE3 544 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 KLHL41O60662 606 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 HNRNPCP07910 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 NCF1P14598 390 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 TCN1P20061 433 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 ELF3P78545 371 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 ARHGAP17Q68EM7 881 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 OXNAD1Q96HP4 312 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 ANKRD27Q96NW4 1050 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 FCHO1O14526 889 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 CDCA2Q69YH5 1023 aaPredicted RBP16.79■□□□□ 0.28
ITGA3-202ENST00000320031 ADCK2Q7Z695 626 aa16.79■□□□□ 0.28
ITGA3-202ENST00000320031 MGEA5O60502 916 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 ATG7O95352 703 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 SELPP16109 830 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 CCL23P55773 120 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 BCL2L1Q07817 233 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 PLD5Q8N7P1 536 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 MRPL46Q9H2W6 279 aaKnown RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 CCDC134Q9H6E4 229 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 TPP1O14773 563 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 SNX3O60493 162 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 WARSP23381 471 aaKnown RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 INTS6LQ5JSJ4 861 aaKnown RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 ARMC12Q5T9G4 340 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 LRRC43Q8N309 656 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 FCRL2Q96LA5 508 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 NMRK1Q9NWW6 199 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 Q9Y3F1 56 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 BCLAF3A2AJT9 711 aaKnown RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 EVPLLA8MZ36 301 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 CA12O43570 354 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 SKIV2LQ15477 1246 aaKnown RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 PSMD5Q16401 504 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 ACBD6Q9BR61 282 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 SAR1AQ9NR31 198 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 PDK4Q16654 411 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 TTC27Q6P3X3 843 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 DRICH1Q6PGQ1 229 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-202ENST00000320031 DCLRE1BQ9H816 532 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 IL1RL2Q9HB29 575 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 KCNK4Q9NYG8 393 aa16.78■□□□□ 0.28
ITGA3-202ENST00000320031 COL18A1P39060 1754 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 C2CD4BA6NLJ0 364 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 GOLGA8TH3BQL2 631 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 SHOX2O60902 331 aaPredicted RBP16.77■□□□□ 0.28
ITGA3-202ENST00000320031 TPSB2P20231 275 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 PPP3CCP48454 512 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 CRADDP78560 199 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 TPSAB1Q15661 275 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 DDR2Q16832 855 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 UNC5AQ6ZN44 842 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 TMPRSS6Q8IU80 811 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 RFWD2Q8NHY2 731 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 TCRBV9S1A1TA0A576 114 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 UBDO15205 165 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 MLNP12872 115 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 ACADSP16219 412 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 HTR7P34969 479 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 CD86P42081 329 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 TMCO4Q5TGY1 634 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 USP6NLQ92738 828 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 ASB2Q96Q27 587 aa16.77■□□□□ 0.28
ITGA3-202ENST00000320031 RNASEH1O60930 286 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms