RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 C14orf80Q86SX3 495 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 RASSF3Q86WH2 238 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CHSY1Q86X52 802 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 ARHGAP12Q8IWW6 846 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SH3TC2Q8TF17 1288 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 C10orf82Q8WW14 230 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 DPF3Q92784 378 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 ATXN7L3BQ96GX2 97 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SERPINB11Q96P15 392 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SLC39A8Q9C0K1 460 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 FBXO44Q9H4M3 255 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CHRAC1Q9NRG0 131 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SCML2Q9UQR0 700 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CHKBQ9Y259 395 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 HS3ST4Q9Y661 456 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 TTC3P53804 2025 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CCDC78A2IDD5 438 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 E9PAM4 449 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 TPP1O14773 563 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 MAFKO60675 156 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 MT-CYBP00156 380 aaPredicted RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 ITGA2BP08514 1039 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 F7P08709 466 aaPredicted RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 CCNCP24863 283 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CNTFP26441 200 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 HNRNPH1P31943 449 aaKnown RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 CRHR1P34998 444 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CCNFP41002 786 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 MLLT6P55198 1093 aaPredicted RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 COG7P83436 770 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 EFEMP1Q12805 493 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 PRPSAP1Q14558 356 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 MGAT5BQ3V5L5 792 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 HSP90AA5PQ58FG0 334 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 TMEM135Q86UB9 458 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 MIB1Q86YT6 1006 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
IFT88-201ENST00000319980 SLAIN1Q8ND83 568 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 RFWD2Q8NHY2 731 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 KLHL29Q96CT2 875 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 ZNF419Q96HQ0 510 aaPredicted RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 C8orf48Q96LL4 319 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 AGAP2Q99490 1192 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 SEPT5Q99719 369 aaPredicted RBP7.73□□□□□ -1.17
IFT88-201ENST00000319980 MYLK2Q9H1R3 596 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CASS4Q9NQ75 786 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 GMIPQ9P107 970 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 LRFN2Q9ULH4 789 aa7.73□□□□□ -1.17
IFT88-201ENST00000319980 CCDC195A0A1B0GUA6 201 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 KCNU1A8MYU2 1149 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 GOLGA8TH3BQL2 631 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 FGF10O15520 208 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 NCALDP61601 193 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TMPRSS15P98073 1019 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 BFSP2Q13515 415 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ANKRD20A4Q4UJ75 823 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 SPANXN3Q5MJ09 141 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 MANEALQ5VSG8 457 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZNF280DQ6N043 979 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TIFABQ6ZNK6 161 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 NLRP9Q7RTR0 991 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TFAP2DQ7Z6R9 452 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 KIF2BQ8N4N8 673 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 LZTR1Q8N653 840 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZNF296Q8WUU4 475 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZNF778Q96MU6 729 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 CASD1Q96PB1 797 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TRIM55Q9BYV6 548 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 KLC4Q9NSK0 619 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 NUP205Q92621 2012 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZCWPW2A0A1B0GU75 182 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 E2F8A0AVK6 867 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PQBP1O60828 265 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 DCTN3O75935 186 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 GNRH1P01148 92 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 YWHAQP27348 245 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TYK2P29597 1187 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 HOXC13P31276 330 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 SLC11A1P49279 550 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TBX4P57082 545 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 KCNJ2P63252 427 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZNF33AQ06730 810 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 CDH17Q12864 832 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PDE1CQ14123 709 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 CHI3L2Q15782 390 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PSMD5Q16401 504 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PIK3R6Q5UE93 754 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 NAPEPLDQ6IQ20 393 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 C16orf46Q6P387 395 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 CYB5D1Q6P9G0 228 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 RSPO2Q6UXX9 243 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 KDELC2Q7Z4H8 507 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TMEM173Q86WV6 379 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 NUDCD3Q8IVD9 361 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 FAM126BQ8IXS8 530 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 IPMKQ8NFU5 416 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ATP2A3Q93084 1043 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms