RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PLK4O00444 970 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 GNA14O95837 355 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 ABCB4P21439 1286 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 NNMTP40261 264 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 ARRB1P49407 418 aaPredicted RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 OXCT1P55809 520 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 PITX1P78337 314 aaPredicted RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 SLC45A4Q5BKX6 768 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 TTC39BQ5VTQ0 682 aaPredicted RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 CXorf57Q6NSI4 855 aaKnown RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 FBXL19Q6PCT2 694 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 CCAR2Q8N163 923 aaKnown RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 CACTIN-AS1Q8N1I8 211 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 ZNF606Q8WXB4 792 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 INTS2Q9H0H0 1204 aaKnown RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 CEP83Q9Y592 693 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 MED7O43513 233 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 PLRG1O43660 514 aaKnown RBP14.65□□□□□ -0.06
RPP40-201ENST00000319533 ATP9BO43861 1147 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 FGFR1OPO95684 399 aaKnown RBP14.65□□□□□ -0.06
RPP40-201ENST00000319533 IL1BP01584 269 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
RPP40-201ENST00000319533 GLI1P08151 1106 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 SLC2A3P11169 496 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 JUPP14923 745 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 VAV1P15498 845 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 HNF1BP35680 557 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 PPP2CBP62714 309 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 PPP2CAP67775 309 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 OVGP1Q12889 678 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 DNAJC3Q13217 504 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 ILKQ13418 452 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 RTP5Q14D33 572 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 CCDC157Q569K6 752 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 SMYD5Q6GMV2 418 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
RPP40-201ENST00000319533 TRIM69Q86WT6 500 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 SPATS2Q86XZ4 545 aaKnown RBP14.65□□□□□ -0.06
RPP40-201ENST00000319533 EID2Q8N6I1 236 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 NXPE2Q96DL1 559 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 SLC2A13Q96QE2 648 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 ASNSD1Q9NWL6 643 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 SLC12A6Q9UHW9 1150 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 PPM1HQ9ULR3 514 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 DMTF1Q9Y222 760 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 OR51B4Q9Y5P0 310 aa14.65□□□□□ -0.06
RPP40-201ENST00000319533 GCN1Q92616 2671 aaKnown RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3DA0A087WVF3 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3IA0A087WXS9 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3EA0A087X179 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3KA0A087X1G2 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3FA6NER0 549 aaPredicted RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3LB9A6J9 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 ALOX15BO15296 676 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 LETM1O95202 739 aaPredicted RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3HP0C7X1 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 KRT5P13647 590 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 PDGFRAP16234 1089 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 METAP1P53582 386 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 STX17P56962 302 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 BNIP3Q12983 259 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 MTA1Q13330 715 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 PDCLQ13371 301 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TAF5Q15542 800 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 C5orf22Q49AR2 442 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 RABGAP1LQ5R372 815 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 C6orf118Q5T5N4 469 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 AGBL4Q5VU57 503 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 FAM46CQ5VWP2 391 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3GQ6DHY5 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3CQ6IPX1 549 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 FBXL22Q6P050 247 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 ENOSF1Q7L5Y1 443 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 DSG4Q86SJ6 1040 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 PRPF39Q86UA1 669 aaKnown RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D3Q8IZP1 549 aaPredicted RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 WDTC1Q8N5D0 677 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 RFFLQ8WZ73 363 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 NRSN2Q9GZP1 204 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 UBE2TQ9NPD8 197 aaPredicted RBP14.64□□□□□ -0.07
RPP40-201ENST00000319533 SARDHQ9UL12 918 aa14.64□□□□□ -0.07
RPP40-201ENST00000319533 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 MCF2LO15068 1137 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 MAGEC1O60732 1142 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 RTN2O75298 545 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 GNA15P30679 374 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 CCR1P32246 355 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 EIF2S3P41091 472 aaKnown RBP14.63□□□□□ -0.07
RPP40-201ENST00000319533 CLDN6P56747 220 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 CDK17Q00537 523 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 TARDBPQ13148 414 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPP40-201ENST00000319533 HES3Q5TGS1 186 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 CIR1Q86X95 450 aaPredicted RBP14.63□□□□□ -0.07
RPP40-201ENST00000319533 DEFB106AQ8N104 65 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 OR52K2Q8NGK3 314 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms