RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 ZBED6P86452 979 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 ALFQ53S48 1182 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 TDRD12Q587J7 1177 aaKnown RBP29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 SH3PXD2AQ5TCZ1 1133 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 IL31Q6EBC2 164 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 SCYL2Q6P3W7 929 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 ZNF783Q6ZMS7 281 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 TFAP2DQ7Z6R9 452 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 DSG4Q86SJ6 1040 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 ZNF683Q8IZ20 524 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 PCED1AQ9H1Q7 454 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 SUSD2Q9UGT4 822 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 CAPN11Q9UMQ6 739 aa29.95■■■□□ 2.39
SYNGR1-202ENST00000318801 MEI4A8MW99 385 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 RTN2O75298 545 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 C7P10643 843 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 PBX1P40424 430 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 HDAC4P56524 1084 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 NRG1Q02297 640 aaPredicted RBP29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 DUOXA1Q1HG43 343 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 C9orf64Q5T6V5 341 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 RWDD4Q6NW29 188 aaKnown RBP29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 ERMP1Q7Z2K6 904 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 DGLUCYQ7Z3D6 616 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 SLFN11Q7Z7L1 901 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 FAM124AQ86V42 546 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 NTAN1Q96AB6 310 aa29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 EVLQ9UI08 416 aaPredicted RBP29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 MUC22E2RYF6 1773 aaPredicted RBP29.94■■■□□ 2.38
SYNGR1-202ENST00000318801 ILVBLA1L0T0 632 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 GDF9O60383 454 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 SKILP12757 684 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 STK19P49842 368 aaPredicted RBP29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 LIMK1P53667 647 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 AIF1P55008 147 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 ELAVL3Q14576 367 aaKnown RBP29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 TRIM61Q5EBN2 209 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 EFHC2Q5JST6 749 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 ALG14Q96F25 216 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 BTBD1Q9H0C5 482 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 CD93Q9NPY3 652 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 TAS2R14Q9NYV8 317 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 FARP1Q9Y4F1 1045 aaPredicted RBP29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 DOCK4Q8N1I0 1966 aa29.93■■■□□ 2.38
SYNGR1-202ENST00000318801 TCRBV5S1A1TA0A578 114 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 SLC30A4O14863 429 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 CFIP05156 583 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 PLEKP08567 350 aaPredicted RBP29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 MYBL1P10243 752 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 ETFBP38117 255 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 RPL7AP62424 266 aaKnown RBP29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 MAMLD1Q13495 774 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 TCEAL6Q6IPX3 200 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 USP30Q70CQ3 517 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 TCEAL3Q969E4 200 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 CCDC114Q96M63 670 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 MTG2Q9H4K7 406 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 SGK2Q9HBY8 427 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 MRPL47Q9HD33 250 aaKnown RBP29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 OR51B4Q9Y5P0 310 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 LAMA1P25391 3075 aa29.92■■■□□ 2.38
SYNGR1-202ENST00000318801 SERPING1P05155 500 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 NUMBP49757 651 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 CST6Q15828 149 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 PPP1R15BQ5SWA1 713 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 SLC41A1Q8IVJ1 513 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 OMDQ99983 421 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 EDEM2Q9BV94 578 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 TMEM74BQ9NUR3 256 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 SCINQ9Y6U3 715 aa29.91■■■□□ 2.38
SYNGR1-202ENST00000318801 CCP110O43303 1012 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 ATP9BO43861 1147 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 ADH1BP00325 375 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 IRX4P78413 519 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 FOXK2Q01167 660 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 GFPT1Q06210 699 aaPredicted RBP29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 STPG1Q5TH74 334 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 PLEKHA7Q6IQ23 1121 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 RETSATQ6NUM9 610 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 SLC23A3Q6PIS1 610 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 TMC6Q7Z403 805 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 MMAAQ8IVH4 418 aaKnown RBP29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 DCAF4L2Q8NA75 395 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 ATP11CQ8NB49 1132 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 OR52K2Q8NGK3 314 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 PTPRN2Q92932 1015 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 SPON2Q9BUD6 331 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 XPO4Q9C0E2 1151 aaKnown RBP29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 PABPC3Q9H361 631 aaKnown RBP29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 FBXL12Q9NXK8 326 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 SLC6A14Q9UN76 642 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 METTL12A8MUP2 240 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 DDX3XO00571 662 aaKnown RBP eCLIP29.9■■■□□ 2.381e-7■■■□□ 18.9
SYNGR1-202ENST00000318801 RNF8O76064 485 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 RHOQP17081 205 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 ATXN3P54252 364 aaPredicted RBP29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 SLC20A2Q08357 652 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 SCAPQ12770 1279 aa29.9■■■□□ 2.38
SYNGR1-202ENST00000318801 DLG2Q15700 870 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms