RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 MRPS26Q9BYN8 205 aaKnown RBP19.49■□□□□ 0.71
RTN4-201ENST00000317610 DRC3Q9H069 523 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 SEPT10Q9P0V9 454 aa19.49■□□□□ 0.71
RTN4-201ENST00000317610 NFKBIEO00221 500 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CREB3O43889 395 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 ZNF189O75820 626 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 AP2A1O95782 977 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CLPTM1O96005 669 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 ASLP04424 464 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 APOA4P06727 396 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 MPSTP25325 297 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 FLOT2Q14254 428 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 LSM12Q3MHD2 195 aaKnown RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 PPM1LQ5SGD2 360 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 OTUD1Q5VV17 481 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 BNIPLQ7Z465 357 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 PGAM4Q8N0Y7 254 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 NETO2Q8NC67 525 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 OR6B3Q8NGW1 331 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 AGAP3Q96P47 875 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 RBM38Q9H0Z9 239 aaKnown RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 PLEKHA5Q9HAU0 1116 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CASS4Q9NQ75 786 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 PIM2Q9P1W9 311 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 VANGL2Q9ULK5 521 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 PHF24Q9UPV7 400 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 AKT3Q9Y243 479 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 MCM3APO60318 1980 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 TIMM44O43615 452 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 PGK2P07205 417 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 XRCC1P18887 633 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 YY1P25490 414 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 RPL14P50914 215 aaKnown RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 PRKAA2P54646 552 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CYLC2Q14093 348 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 DPYSQ14117 519 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 DLG2Q15700 870 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 LRRC23Q53EV4 343 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 SEL1L3Q68CR1 1132 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 ZYG11AQ6WRX3 759 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CRYBG2Q8N1P7 616 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 FAM81AQ8TBF8 368 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 DLG3Q92796 817 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 NMD3Q96D46 503 aaKnown RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 ATXN7L3BQ96GX2 97 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 HIC2Q96JB3 615 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 PGLYRP2Q96PD5 576 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CDRT15Q96T59 188 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 CXCL16Q9H2A7 254 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 WDR55Q9H6Y2 383 aaPredicted RBP19.48■□□□□ 0.71
RTN4-201ENST00000317610 PACSIN3Q9UKS6 424 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 LZTS1Q9Y250 596 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 AP4B1Q9Y6B7 739 aa19.48■□□□□ 0.71
RTN4-201ENST00000317610 GOLGA8QA0A0J9YX86 632 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 PRSS51A0A1B0GVH4 220 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 GOLGA8OA6NCC3 632 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 GOLGA8NF8WBI6 632 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 CNMDO75829 334 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 VTNP04004 478 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 CHRNGP07510 517 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 PPARGP37231 505 aaPredicted RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 SULT1E1P49888 294 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 OLIG2Q13516 323 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 RFTN1Q14699 578 aaPredicted RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 ZBTB6Q15916 424 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 PID1Q7Z2X4 250 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 DEFB106AQ8N104 65 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 TMEM151AQ8N4L1 468 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 METTL25Q8N6Q8 603 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 CCNYQ8ND76 341 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 MPP4Q96JB8 637 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 IL22Q9GZX6 179 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 CAB39LQ9H9S4 337 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 BFARQ9NZS9 450 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 BTBD19C9JJ37 291 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 DCLK1O15075 740 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 GRID2O43424 1007 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 TNFAIP8O95379 198 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 TXNP10599 105 aaKnown RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 ADORA2BP29275 332 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 GTF2A2P52657 109 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 MRPS22P82650 360 aaKnown RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 NSUN2Q08J23 767 aaKnown RBP eCLIP19.47■□□□□ 0.71
RTN4-201ENST00000317610 CEACAM7Q14002 265 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■□□□ 11.4
RTN4-201ENST00000317610 LIPMQ5VYY2 423 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 RBM44Q6ZP01 1051 aaKnown RBP19.47■□□□□ 0.71
RTN4-201ENST00000317610 ALDH16A1Q8IZ83 802 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 LILRA2Q8N149 483 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 GJA3Q9Y6H8 435 aa19.47■□□□□ 0.71
RTN4-201ENST00000317610 DNAJC25-GNG10A0A024R161 153 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 HCRTO43612 131 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 TADA2AO75478 443 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 DAB1O75553 588 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 PTPN3P26045 913 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 HSPA13P48723 471 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 MYBPC1Q00872 1141 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 MPP3Q13368 585 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms