RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 EBF3Q9H4W6 596 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TAS2R1Q9NYW7 299 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PARP2Q9UGN5 583 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 HAO1Q9UJM8 370 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SPO11Q9Y5K1 396 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 RASA4BC9J798 803 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 RASA4O43374 803 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MAFO75444 373 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TTC4O95801 387 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 FTCDO95954 541 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 EIF2S1P05198 315 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PDHA1P08559 390 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 HOXA11P31270 313 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PBX3P40426 434 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 P2RY2P41231 377 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 HALP42357 657 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 AFMP43652 599 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SERPINB4P48594 390 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CDK9P50750 372 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PDE1BQ01064 536 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 HSPA14Q0VDF9 509 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PTP4A2Q12974 167 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PRKD1Q15139 912 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MAPK6Q16659 721 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 FAM187BQ17R55 369 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CEP55Q53EZ4 464 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 XKR4Q5GH76 650 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SPOPLQ6IQ16 392 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 LINC00299Q6ZSB3 139 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CYP2U1Q7Z449 544 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SATL1Q86VE3 508 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CCDC60Q8IWA6 550 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 IQCF2Q8IXL9 164 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 GSTCDQ8NEC7 633 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 LRRC8CQ8TDW0 803 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CHFRQ96EP1 664 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TMA16Q96EY4 203 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 ZFRQ96KR1 1074 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CTRCQ99895 268 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 P2RY13Q9BPV8 354 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TTPALQ9BTX7 342 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 GRIP2Q9C0E4 1043 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 BRD9Q9H8M2 597 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PPCSQ9HAB8 311 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TMEM165Q9HC07 324 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TOR4AQ9NXH8 423 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 EXOC7Q9UPT5 735 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 EP300Q09472 2414 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 ESYT2A0FGR8 921 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MATN2O00339 956 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PSMA7O14818 248 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MAPK13O15264 365 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PMM2O15305 246 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 DXOO77932 396 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 ZWINTO95229 277 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PSAPP07602 524 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CEBPBP17676 345 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PON1P27169 355 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MLH1P40692 756 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 IFNAR2P48551 515 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 DR1Q01658 176 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PTK2Q05397 1052 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 CCNIQ14094 377 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 KIZQ2M2Z5 673 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 ANKRD20A4Q4UJ75 823 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 FSTL4Q6MZW2 842 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SLC36A4Q6YBV0 504 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 OTOAQ7RTW8 1153 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 DAAM2Q86T65 1068 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TMPRSS12Q86WS5 348 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 DEFB124Q8NES8 71 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 GDAP1Q8TB36 358 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 NXPE2Q96DL1 559 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TTC25Q96NG3 672 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SRPK1Q96SB4 655 aaKnown RBP4.31□□□□□ -1.72
POLR2B-201ENST00000314595 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SLC26A6Q9BXS9 759 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 RAB26Q9ULW5 256 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 PHTF1Q9UMS5 762 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 SLC6A14Q9UN76 642 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 TRAF3IP3Q9Y228 551 aa4.31□□□□□ -1.72
POLR2B-201ENST00000314595 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 CCDC22O60826 627 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 FKBP6O75344 327 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 ZNF189O75820 626 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 EIF2DP41214 584 aaKnown RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 RPL5P46777 297 aaKnown RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 PSMD8P48556 350 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 VPS41P49754 854 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 ADARP55265 1226 aaKnown RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 TXNL4AP83876 142 aaKnown RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 NR1H3Q13133 447 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
POLR2B-201ENST00000314595 RCN1Q15293 331 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 RPS6KA1Q15418 735 aa4.3□□□□□ -1.72
POLR2B-201ENST00000314595 EDRF1Q3B7T1 1238 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms