RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 HMGB3O15347 200 aaKnown RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 SNRPB2P08579 225 aaKnown RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 NFICP08651 508 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 IL12AP29459 219 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 CCNIQ14094 377 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 AHI1Q8N157 1196 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 LZTR1Q8N653 840 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 RAET1EQ8TD07 263 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 GIPC3Q8TF64 312 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 MYLPFQ96A32 169 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 VMP1Q96GC9 406 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 VAT1Q99536 393 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 TBL1YQ9BQ87 522 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 OSBPL11Q9BXB4 747 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 ITGA11Q9UKX5 1188 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 CYP2B6P20813 491 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 SQLEQ14534 574 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 DENND5AQ6IQ26 1287 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 TMEM216Q9P0N5 145 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 RGSL1A5PLK6 1076 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 DBTP11182 482 aaKnown RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 RBL1P28749 1068 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 RCVRNP35243 200 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 NUMBP49757 651 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 NAGLUP54802 743 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 HIPK1Q86Z02 1210 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 AADATQ8N5Z0 425 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 SAMD3Q8N6K7 520 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 ADI1Q9BV57 179 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 EURLQ9NYK6 297 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 MTF2Q9Y483 593 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 GMPPBQ9Y5P6 360 aa13.9□□□□□ -0.18
CLCN6-201ENST00000312413 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.18
CLCN6-201ENST00000312413 RAMP2O60895 175 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 OR6B1O95007 311 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 NTSR2O95665 410 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ABHD2P08910 425 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 MIPP30301 263 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GSTM5P46439 218 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 KPNA1P52294 538 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SLC5A9Q2M3M2 681 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GNASQ5JWF2 1037 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 AAGABQ6PD74 315 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 MCOLN3Q8TDD5 553 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 MRPS31Q92665 395 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 MYDGFQ969H8 173 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 TRPM5Q9NZQ8 1165 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ASTN2O75129 1339 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SPTLC1O15269 473 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 CHADO15335 359 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 KCNQ2O43526 872 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 CXCL8P10145 99 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 HPCAL1P37235 193 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ARCQ7LC44 396 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SYT12Q8IV01 421 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 TMEM159Q96B96 161 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 LRRC10BA6NIK2 292 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 BMP10O95393 424 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 NUDT17P0C025 328 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ZSCAN5DPP0CG00 497 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 NDST1P52848 882 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 FOLH1Q04609 750 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SFSWAPQ12872 951 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GPR107Q5VW38 600 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 REPS1Q96D71 796 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 TMEM39BQ9GZU3 492 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 PIGUQ9H490 435 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ATXN10Q9UBB4 475 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 CKMP06732 381 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 ALDH7A1P49419 539 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 BST1Q10588 318 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GATAD2AQ86YP4 633 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 MBOAT7Q96N66 472 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 STN1Q9H668 368 aaKnown RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 TUBA8Q9NY65 449 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 UBE2QL1A1L167 161 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 C2CD2LO14523 706 aa13.89□□□□□ -0.19
CLCN6-201ENST00000312413 LIN7AO14910 233 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-201ENST00000312413 GPR182O15218 404 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms