RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CCNCP24863 283 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 LBX1P52954 281 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 EPHB1P54762 984 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TUBA4AP68366 448 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ZBTB16Q05516 673 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 LBRQ14739 615 aaKnown RBP6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TMED2Q15363 201 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 PPM1LQ5SGD2 360 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TMTC4Q5T4D3 741 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD33Q7Z3H0 272 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 C14orf80Q86SX3 495 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ZC3H18Q86VM9 953 aaKnown RBP6.13□□□□□ -1.43
SEC22A-201ENST00000309934 DBF4BQ8NFT6 615 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 HDAC7Q8WUI4 952 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 OSCP1Q8WVF1 389 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CCDC126Q96EE4 140 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 BTBD6Q96KE9 485 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 C1orf74Q96LT6 269 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ADGRE3Q9BY15 652 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 HAPLN2Q9GZV7 340 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 SMOC2Q9H3U7 446 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 SEPT3Q9UH03 358 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 SFMBT1Q9UHJ3 866 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 FZD10Q9ULW2 581 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TLR6Q9Y2C9 796 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM98Q9Y2Y6 226 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 DFFAO00273 331 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 RAMP2O60895 175 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CLDN11O75508 207 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CRTAMO95727 393 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 NRG1Q02297 640 aaPredicted RBP6.13□□□□□ -1.43
SEC22A-201ENST00000309934 SULT2A1Q06520 285 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TIGD5Q53EQ6 642 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 UGT3A1Q6NUS8 523 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 PALB2Q86YC2 1186 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 EMC1Q8N766 993 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 FAM71DQ8N9W8 422 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 GALNT6Q8NCL4 622 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CCDC197Q8NCU1 140 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 TTC8Q8TAM2 541 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ACMSDQ8TDX5 336 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 LPPQ93052 612 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 AZIN2Q96A70 460 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 E2F7Q96AV8 911 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 PCED1BQ96HM7 432 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 NDNQ99608 321 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 C11orf84Q9BUA3 381 aaPredicted RBP6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CINPQ9BW66 212 aaPredicted RBP6.13□□□□□ -1.43
SEC22A-201ENST00000309934 B3GNT5Q9BYG0 378 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 SIK2Q9H0K1 926 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 CYP4F11Q9HBI6 524 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD6Q9Y2G4 727 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 GMEB1Q9Y692 573 aa6.13□□□□□ -1.43
SEC22A-201ENST00000309934 KAT6AQ92794 2004 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RASA4BC9J798 803 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 GOLGA8MH3BSY2 632 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RASA4O43374 803 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TCEA3O75764 348 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 GRAP2O75791 330 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ZMYND10O75800 440 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 UPP2O95045 317 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 BAG2O95816 211 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SOD2P04179 222 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 USP17L7P0C7H9 530 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MBL2P11226 248 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ACAT1P24752 427 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 MMP13P45452 471 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TUBP50607 506 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ATN1P54259 1190 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ST8SIA6P61647 398 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DPYSL3Q14195 570 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TRIP13Q15645 432 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ZDHHC20Q5W0Z9 365 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PMF1Q6P1K2 205 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 AGMOQ6ZNB7 445 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 CLEC20AQ6ZU45 233 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DEFB128Q7Z7B8 93 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ZNF554Q86TJ5 538 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 FAM131BQ86XD5 332 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 YAF2Q8IY57 180 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 ARHGEF2Q92974 986 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 CFAP36Q96G28 342 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 RPRD1AQ96P16 312 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 IL22Q9GZX6 179 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TKTL2Q9H0I9 626 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 IRF2BPLQ9H1B7 796 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SSU72Q9NP77 194 aaKnown RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 OR12D3Q9UGF7 316 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 KLF15Q9UIH9 416 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 SLC25A13Q9UJS0 675 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 OTOFQ9HC10 1997 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 COL11A1P12107 1806 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 EIF3FO00303 357 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 TXNDC9O14530 226 aa6.12□□□□□ -1.43
SEC22A-201ENST00000309934 PAPSS1O43252 624 aaPredicted RBP6.12□□□□□ -1.43
SEC22A-201ENST00000309934 DCTN3O75935 186 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms