RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FUT11Q495W5 492 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 EOGTQ5NDL2 527 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 NAIF1Q69YI7 327 aaPredicted RBP18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 SPEM1Q8N4L4 309 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 USP33Q8TEY7 942 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 MAGEB5Q9BZ81 275 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 THAP10Q9P2Z0 257 aaPredicted RBP18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 SLC25A13Q9UJS0 675 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 EFR3BQ9Y2G0 817 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 OR51B4Q9Y5P0 310 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 RAD54BQ9Y620 910 aa18.35■□□□□ 0.53
SSSCA1-201ENST00000309328 DCLK1O15075 740 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 TRIM24O15164 1050 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 KIF5CO60282 957 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 PDGFBP01127 241 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 IL4RP24394 825 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 NTSR1P30989 418 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 CCR3P51677 355 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 CLCN6P51797 869 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 TFDP3Q5H9I0 405 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 BZW1Q7L1Q6 419 aaKnown RBP18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 CPNE8Q86YQ8 564 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 RAPGEF5Q92565 580 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 EZH1Q92800 747 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 ALG14Q96F25 216 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 GOLPH3Q9H4A6 298 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 ATP13A1Q9HD20 1204 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 KCND1Q9NSA2 647 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 MTF2Q9Y483 593 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 HYOU1Q9Y4L1 999 aa18.34■□□□□ 0.53
SSSCA1-201ENST00000309328 A0A0U1RQJ8 604 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 PAPSS2O95340 614 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 TNNT1P13805 278 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 MX2P20592 715 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 MZF1P28698 734 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 PTPN7P35236 360 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 MESP2Q0VG99 397 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 ENPP2Q13822 863 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 TAZQ16635 292 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 ATP13A4Q4VNC1 1196 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 TMCO4Q5TGY1 634 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 IL31Q6EBC2 164 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 SYT13Q7L8C5 426 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 CHPFQ8IZ52 775 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 RPLP0P6Q8NHW5 317 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 ATRIPQ8WXE1 791 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 ARHGEF2Q92974 986 aaKnown RBP18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 HES6Q96HZ4 224 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 RNF157Q96PX1 679 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 FBRSQ9HAH7 460 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 DLGAP2Q9P1A6 1054 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 INTS6Q9UL03 887 aaKnown RBP18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 MMP17Q9ULZ9 603 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 KIAA1549LQ6ZVL6 1849 aa18.33■□□□□ 0.52
SSSCA1-201ENST00000309328 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 RASA4BC9J798 803 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 ZBTB24O43167 697 aaPredicted RBP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 RASA4O43374 803 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 DCNP07585 359 aaKnown RBP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 NR2C2P49116 596 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 SEC13P55735 322 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 STARD3Q14849 445 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 PAFAH1B3Q15102 231 aaKnown RBP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 RPS6KA1Q15418 735 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 AFMIDQ63HM1 303 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 TMEM215Q68D42 235 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 SERPINA13PQ6UXR4 307 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 CCDC50Q8IVM0 306 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 REXO1L1PQ8IX06 675 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 IL17RCQ8NAC3 791 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 PRRX2Q99811 253 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 GABRG3Q99928 467 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 LRRC19Q9H756 370 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 RBM12Q9NTZ6 932 aaKnown RBP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 SUN2Q9UH99 717 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 ERVW-1Q9UQF0 538 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 HS3ST2Q9Y278 367 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 JRKLQ9Y4A0 524 aa18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSSCA1-201ENST00000309328 A0A0D9SEW6 157 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 APOL1O14791 398 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 KDELR3O43731 214 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 ZNF189O75820 626 aaPredicted RBP18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 FTCDO95954 541 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 CD48P09326 243 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 AMPD1P23109 780 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 AVPR2P30518 371 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 TIE1P35590 1138 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 CDKN2BP42772 138 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 PEX5P50542 639 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 DGKEP52429 567 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 SERINC3Q13530 473 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 ZNF234Q14588 700 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms