RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 MKRN4PQ13434 485 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SNAP47Q5SQN1 464 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 EID3Q8N140 333 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 MYDGFQ969H8 173 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 REXO5Q96IC2 774 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZNF224Q9NZL3 707 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TMCC3Q9ULS5 477 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ERBB2P04626 1255 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 NAT1P18440 290 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 PPP2R1BP30154 601 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 THOP1P52888 689 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 AQP5P55064 265 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 GRIK3Q13003 919 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 PDZK1Q5T2W1 519 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TIGD7Q6NT04 549 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 HTRA1Q92743 480 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 E9PBE3 544 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TGDSO95455 350 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ITGA2BP08514 1039 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 MIB1Q86YT6 1006 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 KLF6Q99612 283 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TASP1Q9H6P5 420 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SSU72Q9NP77 194 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ETNK2Q9NVF9 386 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 RNF112Q9ULX5 631 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 BAIAP2Q9UQB8 552 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TRIM64A6NGJ6 449 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 TRIM64BA6NI03 449 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 FCHO1O14526 889 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 CTSEP14091 401 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SOX11P35716 441 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 MARSP56192 900 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 MIIPQ5JXC2 388 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 BROXQ5VW32 411 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 EFCAB12Q6NXP0 572 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SLC39A8Q9C0K1 460 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 LOC100653049A0A140TA62 436 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 AXIN1O15169 862 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 KRT34O76011 436 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SLC5A3P53794 718 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 XKR3Q5GH77 459 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 SYTL5Q8TDW5 730 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 REPS1Q96D71 796 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 AIFM3Q96NN9 605 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZCCHC2Q9C0B9 1178 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 CPVLQ9H3G5 476 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 DHX33Q9H6R0 707 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ADAM28Q9UKQ2 775 aa8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 RUVBL2Q9Y230 463 aaKnown RBP8.47□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZSCAN5CA6NGD5 496 aaPredicted RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 CHURC1-FNTBB4DL54 471 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 STMND1H3BQB6 276 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SMIM22K7EJ46 135 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 COQ9O75208 318 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SEC24AO95486 1093 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 ITGA2P17301 1181 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 FAUP35544 74 aaKnown RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 ITGA8P53708 1063 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 PTENP60484 403 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 EXOSC10Q01780 885 aaKnown RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 FNDC3BQ53EP0 1204 aaKnown RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 INO80DQ53TQ3 878 aaPredicted RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 NECAB2Q7Z6G3 386 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 AHI1Q8N157 1196 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SERHL2Q9H4I8 314 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SERHLQ9NQF3 203 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SCAF8Q9UPN6 1271 aaKnown RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 E2F8A0AVK6 867 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 CYP27B1O15528 508 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 MPZL2O60487 215 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 USP12O75317 370 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 PMPCBO75439 489 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 LYNP07948 512 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 TGM2P21980 687 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 GP5P40197 560 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 MAGEA4P43358 317 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SARSP49591 514 aaKnown RBP8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 ZFAND2BQ8WV99 257 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 SIPA1Q96FS4 1042 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 PDCD10Q9BUL8 212 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 CNPPD1Q9BV87 410 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 C3orf18Q9UK00 162 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 IGSF9BQ9UPX0 1349 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 UBE2QL1A1L167 161 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 BBIP1A8MTZ0 92 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 TEX46H3BTG2 121 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 REM1O75628 298 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 HSMCR30P0CW71 290 aa8.46□□□□□ -1.05
PPARGC1B-201ENST00000309241 ITGAXP20702 1163 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms