RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TEX44Q53QW1 395 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 ITPRIPL1Q6GPH6 555 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 KLHDC10Q6PID8 442 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 MIB1Q86YT6 1006 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 LRRC49Q8IUZ0 686 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 UMODL1-AS1Q8N2C9 162 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 ATPAF2Q8N5M1 289 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 TRMT2BQ96GJ1 504 aaKnown RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 TEKT5Q96M29 485 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 CYTH2Q99418 400 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 EBNA1BP2Q99848 306 aaKnown RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 PRMT1Q99873 361 aaKnown RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 SLC39A8Q9C0K1 460 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 KCNH6Q9H252 994 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 NDFIP2Q9NV92 336 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 ZC3H7BQ9UGR2 993 aaKnown RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 TBK1Q9UHD2 729 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 RSPH14Q9UHP6 348 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 VANGL2Q9ULK5 521 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 ERI2A8K979 691 aaKnown RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 TRDMT1O14717 391 aaKnown RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 ZBTB24O43167 697 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 CACNG3O60359 315 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 MAFKO60675 156 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 AP2A1O95782 977 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 LINC00271P0C7V0 271 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 CHN1P15882 459 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 PRKCHP24723 683 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 PBX2P40425 430 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 NDST2P52849 883 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 HTRA4P83105 476 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 NUGGCQ68CJ6 796 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 KCTD11Q693B1 232 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 TIGD7Q6NT04 549 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 DCAKDQ8WVC6 231 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 FATE1Q969F0 183 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 CFAP36Q96G28 342 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 PAFAH2Q99487 392 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 IL12RB2Q99665 862 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 ZYG11BQ9C0D3 744 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 NOL6Q9H6R4 1146 aaKnown RBP12.15□□□□□ -0.46
TRIM40-205ENST00000307859 DONSONQ9NYP3 566 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 STK39Q9UEW8 545 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 DNMT3LQ9UJW3 386 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 MAFFQ9ULX9 164 aa12.15□□□□□ -0.46
TRIM40-205ENST00000307859 DRGXA6NNA5 263 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 PRR33A8MZF0 331 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 F5H423 210 aaPredicted RBP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 DFFAO00273 331 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 LILRB3O75022 631 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 CREB1P16220 341 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 NFKB1P19838 968 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 ATP5C1P36542 298 aaKnown RBP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 KCNQ1P51787 676 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 CREMQ03060 361 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 PPIGQ13427 754 aaKnown RBP eCLIP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 STEAP4Q687X5 459 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 UNC5AQ6ZN44 842 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 ARHGAP36Q6ZRI8 547 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 MPP5Q8N3R9 675 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 CNTD1Q8N815 330 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 AGAP3Q96P47 875 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 MLPHQ9BV36 600 aaPredicted RBP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 EPN3Q9H201 632 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 CYP4F11Q9HBI6 524 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.47
TRIM40-205ENST00000307859 SENP1Q9P0U3 644 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.47
TRIM40-205ENST00000307859 TCF20Q9UGU0 1960 aaKnown RBP12.14□□□□□ -0.47
TRIM40-205ENST00000307859 TMEM120BA0PK00 339 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 ARHGAP42A6NI28 874 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 SDR42E2A6NKP2 422 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 FOXO6A8MYZ6 492 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 RASA4BC9J798 803 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 MATN3O15232 486 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 RASA4O43374 803 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 GJB5O95377 273 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 JCHAINP01591 159 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 CCNB1P14635 433 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 BRAFP15056 766 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 TFF2Q03403 129 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 KBTBD12Q3ZCT8 623 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 C5orf22Q49AR2 442 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms