RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IGSF8Q969P0 613 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SLC39A8Q9C0K1 460 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TASP1Q9H6P5 420 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TRPC7Q9HCX4 862 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MPP6Q9NZW5 540 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NUP205Q92621 2012 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 F5H5T6 163 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RNF103O00237 685 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GREM1O60565 184 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PTPN3P26045 913 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CORO1AP31146 461 aaKnown RBP13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CHKAP35790 457 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NRLP54845 237 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CDK16Q00536 496 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GPR158Q5T848 1215 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 Q6ZNB5 142 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 WBP2Q969T9 261 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 EXOC4Q96A65 974 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CDX2Q99626 313 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 EPB41L4BQ9H329 900 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TRAV19A0A0A6YYK7 116 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 E7ESA3 106 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 AGPSO00116 658 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GFRA2O00451 464 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MATN3O15232 486 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ALOX15BO15296 676 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAFKO60675 156 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CNTN5O94779 1100 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NUDT17P0C025 328 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TPSB2P20231 275 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SLC6A4P31645 630 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CDH4P55283 916 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GPS2Q13227 327 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TPSAB1Q15661 275 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TEX44Q53QW1 395 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ALFQ53S48 1182 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CHST9Q7L1S5 443 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 DENND1CQ8IV53 801 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 KLHDC8BQ8IXV7 354 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CMTM8Q8IZV2 173 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LGI2Q8N0V4 545 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZNF567Q8N184 647 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CELF6Q96J87 481 aaKnown RBP13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZSWIM3Q96MP5 696 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SEMA4AQ9H3S1 761 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CPQQ9Y646 472 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NFS1Q9Y697 457 aa13.13□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CACNG3O60359 315 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CLDN11O75508 207 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 METTL18O95568 372 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CKMP06732 381 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 FSHRP23945 695 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 WEE1P30291 646 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 EIF3BP55884 814 aaKnown RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ARL4CP56559 192 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TNK2Q07912 1038 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PARP15Q460N3 678 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CENPUQ71F23 418 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ATPAF2Q8N5M1 289 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ING5Q8WYH8 240 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAML1Q92585 1016 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms