RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 IL22Q9GZX6 179 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 HAUS2Q9NVX0 235 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 PHTF1Q9UMS5 762 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 BACE2Q9Y5Z0 518 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 GREB1Q4ZG55 1949 aa19.85■□□□□ 0.77
HOXC4-201ENST00000303406 ANKRD65E5RJM6 399 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 F5H423 210 aaPredicted RBP19.84■□□□□ 0.77
HOXC4-201ENST00000303406 GOLGA8RI6L899 631 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 DFFAO00273 331 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 ANXA9O76027 345 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 CDH17Q12864 832 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 ZKSCAN8Q15776 578 aaPredicted RBP19.84■□□□□ 0.77
HOXC4-201ENST00000303406 DBN1Q16643 649 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 ANO4Q32M45 955 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 PIK3R6Q5UE93 754 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 PACS1Q6VY07 963 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 TRIM42Q8IWZ5 723 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 CNTD1Q8N815 330 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 ZNF398Q8TD17 642 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 CERS2Q96G23 380 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 BTN2A3PQ96KV6 586 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 KLF6Q99612 283 aaPredicted RBP19.84■□□□□ 0.77
HOXC4-201ENST00000303406 IQCGQ9H095 443 aaKnown RBP19.84■□□□□ 0.77
HOXC4-201ENST00000303406 GLOD4Q9HC38 313 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 TMEM248Q9NWD8 314 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 KLHL14Q9P2G3 628 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 SLC17A7Q9P2U7 560 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 MTRRQ9UBK8 725 aa19.84■□□□□ 0.77
HOXC4-201ENST00000303406 MYO18AQ92614 2054 aaKnown RBP19.84■□□□□ 0.77
HOXC4-201ENST00000303406 KLF11O14901 512 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 UGT1A9O60656 530 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 CRHR1P34998 444 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 GEMP55040 296 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 CCDC15Q0P6D6 951 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 TAF10Q12962 218 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 MGAT5BQ3V5L5 792 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 SLC8B1Q6J4K2 584 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 RSPO2Q6UXX9 243 aaPredicted RBP19.83■□□□□ 0.77
HOXC4-201ENST00000303406 SLC39A5Q6ZMH5 540 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 RNF19BQ6ZMZ0 732 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 C14orf80Q86SX3 495 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 RNF168Q8IYW5 571 aaPredicted RBP19.83■□□□□ 0.77
HOXC4-201ENST00000303406 TTC9BQ8N6N2 239 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 OVCA2Q8WZ82 227 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 SRPK1Q96SB4 655 aaKnown RBP19.83■□□□□ 0.77
HOXC4-201ENST00000303406 TRIM56Q9BRZ2 755 aaKnown RBP19.83■□□□□ 0.77
HOXC4-201ENST00000303406 ZYG11BQ9C0D3 744 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 RETREG1Q9H6L5 497 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 UGT1A7Q9HAW7 530 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 UGT1A10Q9HAW8 530 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 UGT1A8Q9HAW9 530 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 HSFX1Q9UBD0 423 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 PLLPQ9Y342 182 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 RPS6KL1Q9Y6S9 549 aa19.83■□□□□ 0.77
HOXC4-201ENST00000303406 MICAL3Q7RTP6 2002 aa19.83■□□□□ 0.76
HOXC4-201ENST00000303406 HMX2A2RU54 273 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 MOCS2O96007 188 aaPredicted RBP19.82■□□□□ 0.76
HOXC4-201ENST00000303406 CCL5P13501 91 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 TNK2Q07912 1038 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 EFEMP1Q12805 493 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 MS4A13Q5J8X5 152 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 GRTP1Q5TC63 336 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 DNAAF3Q8N9W5 541 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.82■□□□□ 0.76
HOXC4-201ENST00000303406 RAB3IL1Q8TBN0 382 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 SCLYQ96I15 445 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 CPNE1Q99829 537 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 UBE2OQ9C0C9 1292 aaKnown RBP19.82■□□□□ 0.76
HOXC4-201ENST00000303406 NUDT5Q9UKK9 219 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 SOX13Q9UN79 622 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 SCN5AQ14524 2016 aa19.82■□□□□ 0.76
HOXC4-201ENST00000303406 DRGXA6NNA5 263 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 HOXD11P31277 338 aaPredicted RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 GP5P40197 560 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ARPP19P56211 112 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 CRADDP78560 199 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 USP41Q3LFD5 358 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ANKRD20A4Q4UJ75 823 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 C10orf67Q8IYJ2 551 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 B3GALT6Q96L58 329 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SEPT5Q99719 369 aaPredicted RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RASSF4Q9H2L5 321 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 CRISPLD1Q9H336 500 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 MANSC1Q9H8J5 431 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 MARCH2Q9P0N8 246 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 HBS1LQ9Y450 684 aaKnown RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 TET1Q8NFU7 2136 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SHROOM3Q8TF72 1996 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ZCWPW2A0A1B0GU75 182 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SLC38A8A6NNN8 435 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RFC2P35250 354 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SERPINB4P48594 390 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 TUFMP49411 452 aaKnown RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 LIG3P49916 1009 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RASIP1Q5U651 963 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SNX30Q5VWJ9 437 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 CNKSR3Q6P9H4 555 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ARHGAP36Q6ZRI8 547 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 FAM47EQ6ZV65 393 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RASSF3Q86WH2 238 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms