RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 C12orf66Q96MD2 445 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 C1QTNF1Q9BXJ1 281 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 TRMT13Q9NUP7 481 aaKnown RBP11.09□□□□□ -0.63
MECP2-201ENST00000303391 ZNF180Q9UJW8 692 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 COQ6Q9Y2Z9 468 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 KPNA5O15131 536 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 CHRNGP07510 517 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 TRIM28Q13263 835 aaKnown RBP11.09□□□□□ -0.63
MECP2-201ENST00000303391 EMC2Q15006 297 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 NT5DC3Q86UY8 548 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 FAM49AQ9H0Q0 323 aaPredicted RBP11.09□□□□□ -0.63
MECP2-201ENST00000303391 CHST12Q9NRB3 414 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
MECP2-201ENST00000303391 MYBL2P10244 700 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 CENPAP49450 140 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 RPL10AP62906 217 aaKnown RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 PCSK7Q16549 785 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 SLC39A8Q9C0K1 460 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.08□□□□□ -0.643e-8■■■■■ 36.9
MECP2-201ENST00000303391 ATPIF1Q9UII2 106 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 HARS2P49590 506 aaKnown RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 HERC3Q15034 1050 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 LRRC38Q5VT99 294 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 GALNT18Q6P9A2 607 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 MAGEE2Q8TD90 523 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 UBE2E3Q969T4 207 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 ALDH1A2O94788 518 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 GPC1P35052 558 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 LCN1P1Q5VSP4 162 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 BHLHB9Q6PI77 547 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PADI4Q9UM07 663 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 INVSQ9Y283 1065 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 IST1P53990 364 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PSME3P61289 254 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PI16Q6UXB8 463 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 DSEQ9UL01 958 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 ASB14A6NK59 587 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 MED24O75448 989 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 KBTBD2Q8IY47 623 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 ACTL9Q8TC94 416 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 SSU72Q9NP77 194 aaKnown RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 PCDHGA3Q9Y5H0 932 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 BNIP3LO60238 219 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PTX3P26022 381 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 DGCR6Q14129 220 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 IER5Q5VY09 327 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 BSNDQ8WZ55 320 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 SENP6Q9GZR1 1112 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 TMEM260Q9NX78 707 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PGRMC2O15173 223 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 VDRP11473 427 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 ARPP19P56211 112 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 YWHAZP63104 245 aaKnown RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 PRKCEQ02156 737 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PTSQ03393 145 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 STRIP1Q5VSL9 837 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 TRMOQ9BU70 441 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 LNPEPQ9UIQ6 1025 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 KPNA6O60684 536 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 NADKO95544 446 aaPredicted RBP11.08□□□□□ -0.64
MECP2-201ENST00000303391 GRIA3P42263 894 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 SPATA33Q96N06 139 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 S100A14Q9HCY8 104 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 PLCL2Q9UPR0 1127 aa11.08□□□□□ -0.64
MECP2-201ENST00000303391 A0A0B4J269 797 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 SIN3BO75182 1162 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 PEPDP12955 493 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 SRP54P61011 504 aaKnown RBP11.07□□□□□ -0.64
MECP2-201ENST00000303391 TUBB3Q13509 450 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 SLC9A5Q14940 896 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 TAF5Q15542 800 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 MEIOBQ8N635 442 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 QRFPRQ96P65 431 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 YTHDF1Q9BYJ9 559 aaKnown RBP11.07□□□□□ -0.64
MECP2-201ENST00000303391 RNF146Q9NTX7 359 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 DUSP10Q9Y6W6 482 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 PPLO60437 1756 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 A0A1W2PQ72 361 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ERCC2P18074 760 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ATF4P18848 351 aaPredicted RBP11.07□□□□□ -0.64
MECP2-201ENST00000303391 ELK3P41970 407 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 GPR107Q5VW38 600 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 DPY19L2Q6NUT2 758 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ZNF438Q7Z4V0 828 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 TAS2R13Q9NYV9 303 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ARMCX1Q9P291 453 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 HNF4AP41235 474 aa11.07□□□□□ -0.64
MECP2-201ENST00000303391 ERI1Q8IV48 349 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms