RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FUT11Q495W5 492 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 RNF219Q5W0B1 726 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 ZNF572Q7Z3I7 529 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 MFN1Q8IWA4 741 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CPA6Q8N4T0 437 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 LZTR1Q8N653 840 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 DNASE1L2Q92874 299 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 VOPP1Q96AW1 172 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 HAUS1Q96CS2 278 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 C10orf88Q9H8K7 445 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 PDFQ9HBH1 243 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ABCB8Q9NUT2 735 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CDC23Q9UJX2 597 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 NYNRINQ9P2P1 1898 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 KIAA1549LQ6ZVL6 1849 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 KRBA1A5PL33 1030 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 SPECC1L-ADORA2AF8WAN1 911 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 H0Y626 953 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 J3KR12 359 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 SNAP91O60641 907 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TJP3O95049 919 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TGM2P21980 687 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CTHP32929 405 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 EIF2DP41214 584 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 NR2C2P49116 596 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ARF5P84085 180 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 POLD3Q15054 466 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 OASLQ15646 514 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 LONRF2Q1L5Z9 754 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 PLEKHG6Q3KR16 790 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 SLC44A4Q53GD3 710 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 SEL1L2Q5TEA6 688 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TTC27Q6P3X3 843 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ZNF783Q6ZMS7 281 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 GJD3Q8N144 294 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 KIF18AQ8NI77 898 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 C1orf54Q8WWF1 131 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TTC17Q96AE7 1141 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 MYO19Q96H55 970 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CAPZA3Q96KX2 299 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TSGA13Q96PP4 275 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 LGMNQ99538 433 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 AP1M1Q9BXS5 423 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 MAK16Q9BXY0 300 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 MAGEH1Q9H213 219 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 RRAGDQ9NQL2 400 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 DNAJC17Q9NVM6 304 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 SORCS3Q9UPU3 1222 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 HEY1Q9Y5J3 304 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 K7EQS6 105 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PGRMC1O00264 195 aaKnown RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 KDELR3O43731 214 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 LIASO43766 372 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 RAMP2O60895 175 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 URI1O94763 535 aaPredicted RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 MT-CO1P00395 513 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 RHOCP08134 193 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 VAV1P15498 845 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 ZFXP17010 805 aaPredicted RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 DGKGP49619 791 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 NRLP54845 237 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 NR1H3Q13133 447 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 FZD5Q13467 585 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PRKD1Q15139 912 aaPredicted RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 CCNG2Q16589 344 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PTPRNQ16849 979 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PARP15Q460N3 678 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 C6orf118Q5T5N4 469 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFX3-201ENST00000302303 P3H4Q92791 437 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 NKD2Q969F2 451 aaPredicted RBP9.71□□□□□ -0.86
RFX3-201ENST00000302303 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 MRGPRX3Q96LB0 322 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 L2HGDHQ9H9P8 463 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 GGA2Q9UJY4 613 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 DNPEPQ9ULA0 475 aa9.71□□□□□ -0.86
RFX3-201ENST00000302303 PRAMEF11O60813 436 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 ZNF821O75541 412 aaPredicted RBP9.7□□□□□ -0.86
RFX3-201ENST00000302303 GLULP15104 373 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 CD72P21854 359 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 KCNJ1P48048 391 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 PPIDQ08752 370 aaKnown RBP9.7□□□□□ -0.86
RFX3-201ENST00000302303 WASHC5Q12768 1159 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 XRCC4Q13426 336 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 SLC12A1Q13621 1099 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 CDH18Q13634 790 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 IHHQ14623 411 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 TMEM196Q5HYL7 178 aa9.7□□□□□ -0.86
RFX3-201ENST00000302303 EMC10Q5UCC4 262 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms