RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FAM96AQ9H5X1 160 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 SIX4Q9UIU6 781 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 KIAA1257Q9ULG3 409 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 PRG3Q9Y2Y8 225 aaPredicted RBP14.33□□□□□ -0.11
SDC2-201ENST00000302190 ACOT9Q9Y305 439 aa14.33□□□□□ -0.11
SDC2-201ENST00000302190 CCL22O00626 93 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PMM2O15305 246 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 B4GALT4O60513 344 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 NFKB1P19838 968 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 MPSTP25325 297 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 ABCE1P61221 599 aaKnown RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 BEX3Q00994 111 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 RAB44Q7Z6P3 723 aaPredicted RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 SP110Q9HB58 689 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 UTP6Q9NYH9 597 aaKnown RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PRKAG3Q9UGI9 489 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PSAT1Q9Y617 370 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 BTBD19C9JJ37 291 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 GNGT2O14610 69 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 ENDOD1O94919 500 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 CLPTM1O96005 669 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 T-ENOLP0DO92 83 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PAMP19021 973 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 GRK2P25098 689 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PEX2P28328 305 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 GSTT1P30711 240 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 PTK2BQ14289 1009 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 TMEM198Q66K66 360 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 CCT7Q99832 543 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 COG4Q9H9E3 785 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 ABI2Q9NYB9 513 aaPredicted RBP14.33□□□□□ -0.12
SDC2-201ENST00000302190 PDP2Q9P2J9 529 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
SDC2-201ENST00000302190 DOCK3Q8IZD9 2030 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 TK2O00142 265 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 TRDMT1O14717 391 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 LBX2Q6XYB7 198 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 SLC41A1Q8IVJ1 513 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 KYQ8NBH2 561 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 CMASQ8NFW8 434 aaPredicted RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 CYGBQ8WWM9 190 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 RCN3Q96D15 328 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PTPN18Q99952 460 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 LHX5Q9H2C1 402 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 IPO11Q9UI26 975 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 ATP8B3O60423 1300 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 SCAMP3O14828 347 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 SIN3BO75182 1162 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 CD4P01730 458 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 STMN1P16949 149 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PGAM1P18669 254 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 ACADSBP45954 432 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 SH3BGRP55822 239 aaPredicted RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 ZNF484Q5JVG2 852 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 TTC30AQ86WT1 665 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 ARL10Q8N8L6 244 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PPHLN1Q8NEY8 458 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PCYT2Q99447 389 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 ECSITQ9BQ95 431 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 TKTL2Q9H0I9 626 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PCDHGC3Q9UN70 934 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 CRYL1Q9Y2S2 319 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 C2P06681 752 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 PIRTP0C851 137 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 THRAP10827 490 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 FASTKD5Q7L8L6 764 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 EFHBQ8N7U6 833 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 ZNF781Q8N8C0 355 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 OR6Y1Q8NGX8 325 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 URGCPQ8TCY9 931 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 DENND1AQ8TEH3 1009 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 IFT43Q96FT9 208 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 GAD1Q99259 594 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 NIFKQ9BYG3 293 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 RBM22Q9NW64 420 aaKnown RBP eCLIP14.32□□□□□ -0.12
SDC2-201ENST00000302190 WARS2Q9UGM6 360 aaKnown RBP14.32□□□□□ -0.12
SDC2-201ENST00000302190 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
SDC2-201ENST00000302190 SAC3D1A6NKF1 404 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 TPD52L2O43399 206 aaKnown RBP14.31□□□□□ -0.12
SDC2-201ENST00000302190 PTPN7P35236 360 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 SOWAHAQ2M3V2 549 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 ZNF618Q5T7W0 954 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 DRICH1Q6PGQ1 229 aaPredicted RBP14.31□□□□□ -0.12
SDC2-201ENST00000302190 ANKRD23Q86SG2 305 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 RIOX2Q8IUF8 465 aa14.31□□□□□ -0.12
SDC2-201ENST00000302190 BHLHE22Q8NFJ8 381 aaPredicted RBP14.31□□□□□ -0.12
SDC2-201ENST00000302190 ZNF398Q8TD17 642 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms