RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ASTE1Q2TB18 679 aaPredicted RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 PLEKHG4Q58EX7 1191 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 THEMIS2Q5TEJ8 643 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 FAXCQ5TGI0 409 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 PRUNE1Q86TP1 453 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ANKRD7Q92527 254 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ZCWPW1Q9H0M4 648 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 NMRK1Q9NWW6 199 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 IRAK4Q9NWZ3 460 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 GOT1P17174 413 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 GABRB2P47870 512 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 SLC12A1Q13621 1099 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 DMC1Q14565 340 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 MAB21L3Q8N8X9 362 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 LRRC15Q8TF66 581 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 CHMP6Q96FZ7 201 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF599Q96NL3 588 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 CDC42EP4Q9H3Q1 356 aaKnown RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 AGO3Q9H9G7 860 aaKnown RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 OGDHLQ9ULD0 1010 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 SCN4AP35499 1836 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF839A8K0R7 811 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 E9PAM4 449 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ALDH1A2O94788 518 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 OCRLQ01968 901 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF33AQ06730 810 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ARMC6Q6NXE6 501 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 PRSS55Q6UWB4 352 aaPredicted RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 GLT6D1Q7Z4J2 308 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 TAC4Q86UU9 113 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 ARNTL2Q8WYA1 636 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 MLPHQ9BV36 600 aaPredicted RBP8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 XYLT2Q9H1B5 865 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 BRD9Q9H8M2 597 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 CNTN6Q9UQ52 1028 aa8.47□□□□□ -1.05
SNRPD1-201ENST00000300413 CCL16O15467 120 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 OR56A5P0C7T3 313 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 TPSB2P20231 275 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 HMOX2P30519 316 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 MTHFRP42898 656 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 GJA8P48165 433 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF132P52740 706 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 TAS2R40P59535 323 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 AP1S1P61966 158 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 STX3Q13277 289 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 LBRQ14739 615 aaKnown RBP8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 TPSAB1Q15661 275 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 DPYSL2Q16555 572 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 SDHAF4Q5VUM1 108 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 FBXL19Q6PCT2 694 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 TPGS1Q6ZTW0 290 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 BEND5Q7L4P6 421 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 OOSP2Q86WS3 158 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 FUKQ8N0W3 1084 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 RTL3Q8N8U3 475 aaKnown RBP8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 LRRC57Q8N9N7 239 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 MAML1Q92585 1016 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 SPATA17Q96L03 361 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 TRIM15Q9C019 465 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 SMOC2Q9H3U7 446 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 ZDHHC4Q9NPG8 344 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 NUDT5Q9UKK9 219 aa8.46□□□□□ -1.05
SNRPD1-201ENST00000300413 WDR91A4D1P6 747 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TRIM49D1C9J1S8 452 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 KCNK1O00180 336 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 OAZ2O95190 189 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 ADRA1DP25100 572 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 ABCE1P61221 599 aaKnown RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 HIST2H2ACQ16777 129 aaPredicted RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 HIST2H2AA3Q6FI13 130 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 SERPINA13PQ6UXR4 307 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 MTSS1LQ765P7 747 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC22A9Q8IVM8 553 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TIFAQ96CG3 184 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 QKIQ96PU8 341 aaKnown RBP eCLIP8.46□□□□□ -1.062e-8■■■■■ 33.2
SNRPD1-201ENST00000300413 TRIM45Q9H8W5 580 aaPredicted RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 ZFP14Q9HCL3 533 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 RIC8BQ9NVN3 520 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 SFMBT1Q9UHJ3 866 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC39A10Q9ULF5 831 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TCHHQ07283 1943 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TM9SF1O15321 606 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 LATS1O95835 1130 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 MSH3P20585 1137 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 PTPN3P26045 913 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TPD52P55327 224 aaPredicted RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 RBBP5Q15291 538 aaKnown RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 DNAJB7Q7Z6W7 309 aaPredicted RBP8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 PRELID2Q8N945 189 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 LRGUKQ96M69 825 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 PRDM10Q9NQV6 1147 aa8.46□□□□□ -1.06
SNRPD1-201ENST00000300413 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms