RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 SNAP91O60641 907 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 VNN2O95498 520 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 TIMP1P01033 207 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 GLRBP48167 497 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 EIF3BP55884 814 aaKnown RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 QPCTQ16769 361 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 MREGQ8N565 214 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 ARFGAP2Q8N6H7 521 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 PPP1R14CQ8TAE6 165 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 SPPL2BQ8TCT7 592 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 EXT2Q93063 718 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 MCOLN1Q9GZU1 580 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 C20orf96Q9NUD7 363 aaPredicted RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 RAMP2O60895 175 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CDH16O75309 829 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 C8AP07357 584 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 FGFR3P22607 806 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 ERFP50548 548 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 ZCCHC23Q6ZST2 131 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 RAPH1Q70E73 1250 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 TAOK1Q7L7X3 1001 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CMC1Q7Z7K0 106 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 ZNF461Q8TAF7 563 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 MECRQ9BV79 373 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CWH43Q9H720 699 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
TTC17-202ENST00000299240 SAGE1Q9NXZ1 904 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CPSF2Q9P2I0 782 aaKnown RBP12.89□□□□□ -0.35
TTC17-202ENST00000299240 PSAT1Q9Y617 370 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CPQQ9Y646 472 aa12.89□□□□□ -0.35
TTC17-202ENST00000299240 CAV1Q03135 178 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 CTBP1Q13363 440 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 ZNF235Q14590 738 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 DLG2Q15700 870 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 ANO4Q32M45 955 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 PPM1JQ5JR12 505 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 CNTD1Q8N815 330 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 APBB2Q92870 758 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 FIS1Q9Y3D6 152 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 INPPL1O15357 1258 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 VAPBO95292 243 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 SARNPP82979 210 aaKnown RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 LIMS2Q7Z4I7 341 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 PCGF5Q86SE9 256 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 SUDS3Q9H7L9 328 aaPredicted RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 CATSPERBQ9H7T0 1116 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 SLC17A7Q9P2U7 560 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 G3BP2Q9UN86 482 aaKnown RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 OR51F1A6NGY5 319 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 TRIM24O15164 1050 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 ADRA1DP25100 572 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 PM20D1Q6GTS8 502 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 QKIQ96PU8 341 aaKnown RBP eCLIP12.88□□□□□ -0.354e-17■■■■■ 69.4
TTC17-202ENST00000299240 CCT8L2Q96SF2 557 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
TTC17-202ENST00000299240 ZNF358Q9NW07 568 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
TTC17-202ENST00000299240 DCLK1O15075 740 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 TGM5O43548 720 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 CA3P07451 260 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 CSH1P0DML2 217 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 CSH2P0DML3 217 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 MX2P20592 715 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 TUFMP49411 452 aaKnown RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 EPHB3P54753 998 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ATP6V0D2Q8N8Y2 350 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 FAM161BQ96MY7 647 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 SLC2A6Q9UGQ3 507 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms