RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 ADAM32Q8TC27 787 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 RPF2Q9H7B2 306 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 KPNA7A9QM74 516 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 FOXD2O60548 495 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TRIM13O60858 407 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CLASP2O75122 1294 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 BAIAP3O94812 1187 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 PGAM1P18669 254 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TCN1P20061 433 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 FGFR3P22607 806 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GP5P40197 560 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 C21orf59P57076 290 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CRADDP78560 199 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 RHDQ02161 417 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 NSUN2Q08J23 767 aaKnown RBP eCLIP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 PTK2BQ14289 1009 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 STRIP1Q5VSL9 837 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CASC4Q6P4E1 433 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CCDC60Q8IWA6 550 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CPNE9Q8IYJ1 553 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF420Q8TAQ5 688 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ZSCAN18Q8TBC5 510 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CHPT1Q8WUD6 406 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ARNTL2Q8WYA1 636 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 EIF2AQ9BY44 585 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ILKAPQ9H0C8 392 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 RAP2CQ9Y3L5 183 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 AFG3L2Q9Y4W6 797 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TRIM64BA6NI03 449 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 K7EPI3 171 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 CHRNGP07510 517 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GSTT2P0CG29 244 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GSTT2BP0CG30 244 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 NFKBIAP25963 317 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 MTERF2Q49AM1 385 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 NANOGP8Q6NSW7 305 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TFAP2CQ92754 450 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 SLCO4A1Q96BD0 722 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 THAP11Q96EK4 314 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 TRPV6Q9H1D0 765 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 ANLNQ9NQW6 1124 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 GPATCH2LQ9NWQ4 482 aa13.77□□□□□ -0.21
RPUSD4-201ENST00000298317 FER1L6Q2WGJ9 1857 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 H3BMQ9 156 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 GRID2O43424 1007 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 ZBTB11O95625 1053 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 PSAPP07602 524 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 MCF2P10911 925 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 DCKP27707 260 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 RXRGP48443 463 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 TRIM25Q14258 630 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 DCAF6Q58WW2 860 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 TMEM198Q66K66 360 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 HMBOX1Q6NT76 420 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 NIPAL1Q6NVV3 410 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 CLEC14AQ86T13 490 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 TMA16Q96EY4 203 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 COG8Q96MW5 612 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 GPATCH1Q9BRR8 931 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF670Q9BS34 389 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 PORCNQ9H237 461 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 SPO11Q9Y5K1 396 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 TANC1Q9C0D5 1861 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
RPUSD4-201ENST00000298317 LTFP02788 710 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 RPL14P50914 215 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 NEK2P51955 445 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 DUOXA2Q1HG44 320 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 DCLK2Q8N568 766 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 SREK1Q8WXA9 508 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 RMDN3Q96TC7 470 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 NPAS2Q99743 824 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 CIB1Q99828 191 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms