RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 UBQLN1Q9UMX0 589 aaKnown RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 CFLARO15519 480 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 FKBP6O75344 327 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 NMBRP28336 390 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 GRAMD1BQ3KR37 738 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 STXBP5Q5T5C0 1151 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 GRTP1Q5TC63 336 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 PGM2L1Q6PCE3 622 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 KDELC2Q7Z4H8 507 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 PNPLA1Q8N8W4 532 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 OR6J1Q8NGC5 347 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 URGCPQ8TCY9 931 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 CMTM5Q96DZ9 223 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 NPY6RQ99463 290 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 RHOBTB2Q9BYZ6 727 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 ULBP1Q9BZM6 244 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 MEIS3P2A8K0S8 358 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 AHCYL1O43865 530 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 CCNT2O60583 730 aaKnown RBP24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 JUNP05412 331 aaKnown RBP24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 FYNP06241 537 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 MMP3P08254 477 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 NFKB1P19838 968 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 ALKAL1Q6UXT8 129 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 HSFY1Q96LI6 401 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 NUF2Q9BZD4 464 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 LRRC40Q9H9A6 602 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 BFARQ9NZS9 450 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 SORCS3Q9UPU3 1222 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 SSX2IPQ9Y2D8 614 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 PCDHB12Q9Y5F1 795 aa24.9■■□□□ 1.58
SPTSSA-201ENST00000298130 OTOFQ9HC10 1997 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 DCLK1O15075 740 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 SPRP35270 261 aaPredicted RBP24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 ACADSBP45954 432 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 NUDT2P50583 147 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 LIMK2P53671 638 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 DPYSQ14117 519 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 ZNF792Q3KQV3 632 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 PDSS2Q86YH6 399 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 PSTKQ8IV42 348 aaKnown RBP24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 ACTRT2Q8TDY3 377 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 USP13Q92995 863 aaPredicted RBP24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 APBA2Q99767 749 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 DUSP16Q9BY84 665 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 TASP1Q9H6P5 420 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 TMEM30AQ9NV96 361 aa24.89■■□□□ 1.58
SPTSSA-201ENST00000298130 XPO1O14980 1071 aaKnown RBP24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 USP17L7P0C7H9 530 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 TAF6P49848 677 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 LILRA4P59901 499 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 SPANXN3Q5MJ09 141 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 EPGNQ6UW88 154 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 CLEC20AQ6ZU45 233 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 OTOP3Q7RTS5 596 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 KCNMB4Q86W47 210 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 NMRAL1Q9HBL8 299 aa24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 EIF2B3Q9NR50 452 aaKnown RBP24.89■■□□□ 1.57
SPTSSA-201ENST00000298130 AP1G2O75843 785 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 ARSAP15289 507 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 NOS2P35228 1153 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 SERPINB8P50452 374 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 PKNOX1P55347 436 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 TPI1P60174 286 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 GRM3Q14832 879 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 RASIP1Q5U651 963 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 ZNF410Q86VK4 478 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 WNT8BQ93098 351 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 GCNAQ96QF7 691 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 NCAM1P13591 858 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 NPR3P17342 541 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 AFF1P51825 1210 aaKnown RBP24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 NXNQ6DKJ4 435 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 SNX32Q86XE0 403 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 OMDQ99983 421 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 FERMT1Q9BQL6 677 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 IGSF9Q9P2J2 1179 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 BRCA1P38398 1863 aaKnown RBP24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 STX16-NPEPL1H3BU86 382 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 DYNC1LI2O43237 492 aaPredicted RBP24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 DAB1O75553 588 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 JCHAINP01591 159 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 CYP2C9P11712 490 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 ADRA1BP35368 520 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 MPP3Q13368 585 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 FBXW8Q8N3Y1 598 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 SGF29Q96ES7 293 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 VPS39Q96JC1 886 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 SCYL1Q96KG9 808 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 TCF7L2Q9NQB0 619 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 KCNH4Q9UQ05 1017 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 AK5Q9Y6K8 562 aa24.88■■□□□ 1.57
SPTSSA-201ENST00000298130 CAPN8A6NHC0 703 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 AP2A1O95782 977 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 DPP9Q86TI2 863 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 SPATA22Q8NHS9 363 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 PPP2R3CQ969Q6 453 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 SIKE1Q9BRV8 207 aa24.87■■□□□ 1.57
SPTSSA-201ENST00000298130 KATNBL1Q9H079 304 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms