RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 ZBTB24O43167 697 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 ACSL4O60488 711 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 CNTN5O94779 1100 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 F11P03951 625 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 CD68P34810 354 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 PHBP35232 272 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 IFI35P80217 286 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 MTM1Q13496 603 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 ZKSCAN8Q15776 578 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 ITPRIPL1Q6GPH6 555 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 CHSY1Q86X52 802 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 CABS1Q96KC9 395 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 GORASP1Q9BQQ3 440 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 STMN4Q9H169 189 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 IL21Q9HBE4 155 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 ZNF334Q9HCZ1 680 aaPredicted RBP15.91■□□□□ 0.14
LSM6-201ENST00000296581 ADH1AP07327 375 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 SPATA31D3P0C874 917 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 SSTR1P30872 391 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 CA8P35219 290 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 CTNNB1P35222 781 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 ERVFC1P60507 584 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 MAGOHP61326 146 aaKnown RBP15.9■□□□□ 0.14
LSM6-201ENST00000296581 SPATA31D4Q6ZUB0 917 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 PALM2Q8IXS6 379 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 IL12RB2Q99665 862 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 KLF16Q9BXK1 252 aaPredicted RBP15.9■□□□□ 0.14
LSM6-201ENST00000296581 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 MTIF3Q9H2K0 278 aaKnown RBP15.9■□□□□ 0.14
LSM6-201ENST00000296581 PPCSQ9HAB8 311 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 RWDD3Q9Y3V2 267 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 DENND4CQ5VZ89 1909 aa15.9■□□□□ 0.14
LSM6-201ENST00000296581 GOLGA6L7A0A1B0GV03 622 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 C2orf78A6NCI8 922 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 MATN3O15232 486 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 CACNG3O60359 315 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 CDH16O75309 829 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 HARS2P49590 506 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 PAPOLAP51003 745 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 FAM133BQ5BKY9 247 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 TIGD7Q6NT04 549 aaPredicted RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 LRRC8BQ6P9F7 803 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 C3orf62Q6ZUJ4 267 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 TDRPQ86YL5 185 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 KLHDC8BQ8IXV7 354 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 RIBC1Q8N443 379 aaPredicted RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 ARFGAP2Q8N6H7 521 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 FATE1Q969F0 183 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 SIGLEC10Q96LC7 697 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 RPRD1AQ96P16 312 aaPredicted RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 TCF25Q9BQ70 676 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 RETREG1Q9H6L5 497 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 ACSS3Q9H6R3 686 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 FETUBQ9UGM5 382 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 RABGEF1Q9UJ41 708 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 MTCL1Q9Y4B5 1905 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 EXOC1LA0A1B0GW35 172 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 F5H423 210 aaPredicted RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 SPAG6O75602 509 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 STC2O76061 302 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 SUN1O94901 812 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 JCHAINP01591 159 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 CCNB1P14635 433 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 GCAP28676 217 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 GRIA1P42261 906 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 SLC11A2P49281 568 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 RASA2Q15283 850 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 PABPC1LQ4VXU2 614 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 CAPN12Q6ZSI9 719 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 CCDC149Q6ZUS6 474 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 TFAP2DQ7Z6R9 452 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 CNTD1Q8N815 330 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 MYEOVQ96EZ4 313 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 AGAP3Q96P47 875 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
LSM6-201ENST00000296581 ALG13Q9NP73 1137 aaKnown RBP15.89■□□□□ 0.13
LSM6-201ENST00000296581 LINC01553A4QN01 128 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 ANKRD33BA6NCL7 494 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 ERI2A8K979 691 aaKnown RBP15.88■□□□□ 0.13
LSM6-201ENST00000296581 F5H5T6 163 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 OLFM2O95897 454 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 NFKB1P19838 968 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 SLC6A4P31645 630 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 MMP13P45452 471 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 MAPKAPK2P49137 400 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 PREPLQ4J6C6 727 aaPredicted RBP15.88■□□□□ 0.13
LSM6-201ENST00000296581 KCTD11Q693B1 232 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 SPPL3Q8TCT6 385 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 MAML1Q92585 1016 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 HTATIP2Q9BUP3 242 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 LRRC3Q9BY71 257 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 CTNNAL1Q9UBT7 734 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 IPO11Q9UI26 975 aaKnown RBP15.88■□□□□ 0.13
LSM6-201ENST00000296581 CHD5Q8TDI0 1954 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 AP2A1O95782 977 aa15.88■□□□□ 0.13
LSM6-201ENST00000296581 KLKB1P03952 638 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms