RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SLC22A12Q96S37 553 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 GORASP1Q9BQQ3 440 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 LRRC3Q9BY71 257 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 XAB2Q9HCS7 855 aaKnown RBP23.38■■□□□ 1.33
PTX3-201ENST00000295927 RGS16O15492 202 aaPredicted RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 IFI35P80217 286 aaPredicted RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 SARNPP82979 210 aaKnown RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 TXNDC8Q6A555 127 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 ITPRIPL1Q6GPH6 555 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 FAM109BQ6ICB4 259 aaPredicted RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 GAREM2Q75VX8 874 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 CNTD1Q8N815 330 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 MICAL1Q8TDZ2 1067 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 SMPD4Q9NXE4 827 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 IPO11Q9UI26 975 aaKnown RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 NFKB1P19838 968 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 CLCN4P51793 760 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 DNAJC21Q5F1R6 531 aaKnown RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 TIGD7Q6NT04 549 aaPredicted RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 C3orf62Q6ZUJ4 267 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 CFAP52Q8N1V2 620 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 ARL14EPQ8N8R7 260 aaPredicted RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 TLCD1Q96CP7 247 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 HMCESQ96FZ2 354 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 ZFRQ96KR1 1074 aaKnown RBP23.37■■□□□ 1.33
PTX3-201ENST00000295927 IL12RB2Q99665 862 aa23.37■■□□□ 1.33
PTX3-201ENST00000295927 ARHGAP42A6NI28 874 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 RASA4BC9J798 803 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 GRM6O15303 877 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 RASA4O43374 803 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 IVLP07476 585 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 TSHRP16473 764 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 PHBP35232 272 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 CYP4F8P98187 520 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 CAMK1Q14012 370 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 ELMOD1Q8N336 334 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 SLC22A17Q8WUG5 538 aa23.36■■□□□ 1.33
PTX3-201ENST00000295927 AGO1Q9UL18 857 aaKnown RBP23.36■■□□□ 1.33
PTX3-201ENST00000295927 OLFM2O95897 454 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 RB1P06400 928 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 MLNP12872 115 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 HDCP19113 662 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 IRS1P35568 1242 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 MAPKAPK2P49137 400 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 MAGOHP61326 146 aaKnown RBP23.35■■□□□ 1.33
PTX3-201ENST00000295927 MRPS31Q92665 395 aaKnown RBP23.35■■□□□ 1.33
PTX3-201ENST00000295927 LRRC39Q96DD0 335 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 ZNF419Q96HQ0 510 aaPredicted RBP23.35■■□□□ 1.33
PTX3-201ENST00000295927 SIGLEC10Q96LC7 697 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 EXOC1LA0A1B0GW35 172 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 CCL16O15467 120 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 LPXNO60711 386 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 NR1D1P20393 614 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 OR1E1P30953 314 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 PPM1LQ5SGD2 360 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 LRRC8BQ6P9F7 803 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 CTNNAL1Q9UBT7 734 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 RABGEF1Q9UJ41 708 aa23.35■■□□□ 1.33
PTX3-201ENST00000295927 ZFP37Q9Y6Q3 630 aaPredicted RBP23.35■■□□□ 1.33
PTX3-201ENST00000295927 TRDMT1O14717 391 aaKnown RBP23.34■■□□□ 1.33
PTX3-201ENST00000295927 RAMP2O60895 175 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 AGTP01019 485 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 CA3P07451 260 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 SMAD3P84022 425 aaKnown RBP23.34■■□□□ 1.33
PTX3-201ENST00000295927 GABPB1Q06547 395 aaPredicted RBP23.34■■□□□ 1.33
PTX3-201ENST00000295927 SPARCL1Q14515 664 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 POLD3Q15054 466 aaPredicted RBP23.34■■□□□ 1.33
PTX3-201ENST00000295927 TNFAIP8L3Q5GJ75 292 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 RABGAP1LQ5R372 815 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 ADGRF1Q5T601 910 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 MPP5Q8N3R9 675 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 MAML1Q92585 1016 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 PRICKLE1Q96MT3 831 aaPredicted RBP23.34■■□□□ 1.33
PTX3-201ENST00000295927 CORO1BQ9BR76 489 aa23.34■■□□□ 1.33
PTX3-201ENST00000295927 AP2A1O95782 977 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 HPDP32754 393 aaPredicted RBP23.33■■□□□ 1.33
PTX3-201ENST00000295927 SHHQ15465 462 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 OTOP3Q7RTS5 596 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 FBF1Q8TES7 1133 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 MLPHQ9BV36 600 aaPredicted RBP23.33■■□□□ 1.33
PTX3-201ENST00000295927 CHD5Q8TDI0 1954 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 DOCK6Q96HP0 2047 aa23.33■■□□□ 1.33
PTX3-201ENST00000295927 J3KR12 359 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 NRG2O14511 850 aaPredicted RBP23.33■■□□□ 1.32
PTX3-201ENST00000295927 CACNG3O60359 315 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 SUN1O94901 812 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 PEX11BO96011 259 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 GCAP28676 217 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 YBEYP58557 167 aaPredicted RBP23.33■■□□□ 1.32
PTX3-201ENST00000295927 RPS24P62847 133 aaKnown RBP23.33■■□□□ 1.32
PTX3-201ENST00000295927 ZXDBP98169 803 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 ANO4Q32M45 955 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 PARP15Q460N3 678 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 KCTD11Q693B1 232 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 MAB21L3Q8N8X9 362 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 ADAMTS19Q8TE59 1207 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 FATE1Q969F0 183 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 CFAP36Q96G28 342 aa23.33■■□□□ 1.32
PTX3-201ENST00000295927 STMN4Q9H169 189 aaPredicted RBP23.33■■□□□ 1.32
PTX3-201ENST00000295927 ATXN3LQ9H3M9 355 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms