RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CREMQ03060 361 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 VAC14Q08AM6 782 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 PWP2Q15269 919 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 OASLQ15646 514 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
PTCD1-201ENST00000292478 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 METTL6Q8TCB7 284 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 GAD1Q99259 594 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 CIPCQ9C0C6 399 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 KRT84Q9NSB2 600 aa13.01□□□□□ -0.33
PTCD1-201ENST00000292478 ADCY6O43306 1168 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 RASSF9O75901 435 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ENPEPQ07075 957 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 DSG4Q86SJ6 1040 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 EID3Q8N140 333 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 RASGEF1CQ8N431 466 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 B3GALNT2Q8NCR0 500 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 PIWIL2Q8TC59 973 aaKnown RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 GDPD5Q8WTR4 605 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 CERS2Q96G23 380 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ADAM2Q99965 735 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 DISP2A7MBM2 1401 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 BMP10O95393 424 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 LDLRP01130 860 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ETS1P14921 441 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 PHKG1Q16816 387 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 C15orf59Q2T9L4 293 aaPredicted RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 WSCD1Q658N2 575 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM26Q6ZUK4 368 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 STAG3L4Q8TBR4 150 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ADAM32Q8TC27 787 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 MAGEB10Q96LZ2 347 aaPredicted RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM79Q9BSE2 394 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 C9orf16Q9BUW7 83 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 RCCD1A6NED2 376 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 XYLBO75191 536 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 PSMB4P28070 264 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 PLIN5Q00G26 463 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM132CQ8N3T6 1108 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 SETD9Q8NE22 299 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 INPP4AQ96PE3 977 aaPredicted RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 KLHL28Q9NXS3 571 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
PTCD1-201ENST00000292478 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 IL2P60568 153 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 PDK4Q16654 411 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 ARSHQ5FYA8 562 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 CYP4Z2PQ8N1L4 340 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 SVOPQ8N4V2 548 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 FAM136AQ96C01 138 aa13□□□□□ -0.33
PTCD1-201ENST00000292478 XRN2Q9H0D6 950 aaKnown RBP eCLIP13□□□□□ -0.33
PTCD1-201ENST00000292478 CES1P23141 567 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZSWIM2Q8NEG5 633 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 FTHL17Q9BXU8 183 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZCWPW1Q9H0M4 648 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ACSS3Q9H6R3 686 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 C6orf203Q9P0P8 240 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF112Q9UJU3 913 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PADI4Q9UM07 663 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 RPL26L1Q9UNX3 145 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 DYTNA2CJ06 578 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 TNFAIP8O95379 198 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 LCA5LO95447 670 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SERPINA4P29622 427 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 NEK3P51956 506 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SNX32Q86XE0 403 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 GPSM1Q86YR5 675 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 KIAA0319LQ8IZA0 1049 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PNMA8BQ9ULN7 279 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 BTN3A1O00481 513 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ALOX15BO15296 676 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PIGNO95427 931 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZCCHC18P0CG32 403 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ATP5F1P24539 256 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 TRAF2Q12933 501 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 BTG3Q14201 252 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 NCF4Q15080 339 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 LYPLAL1Q5VWZ2 237 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PPP4R4Q6NUP7 873 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms