RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MAGEH1Q9H213 219 aa27.59■■■□□ 2.01
SSU72-201ENST00000291386 ZSCAN32Q9NX65 697 aa27.59■■■□□ 2.01
SSU72-201ENST00000291386 TFR2Q9UP52 801 aa27.59■■■□□ 2.01
SSU72-201ENST00000291386 A0A0D9SEW6 157 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 CTSOP43234 321 aaPredicted RBP27.58■■■□□ 2.01
SSU72-201ENST00000291386 FNDC3BQ53EP0 1204 aaKnown RBP27.58■■■□□ 2.01
SSU72-201ENST00000291386 RFX8Q6ZV50 586 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 POLNQ7Z5Q5 900 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 TXLNBQ8N3L3 684 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 C2orf49Q9BVC5 232 aaPredicted RBP27.58■■■□□ 2.01
SSU72-201ENST00000291386 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.58■■■□□ 2.01
SSU72-201ENST00000291386 CWC15Q9P013 229 aaKnown RBP27.58■■■□□ 2.01
SSU72-201ENST00000291386 DNAI1Q9UI46 699 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 PCDHGA2Q9Y5H1 932 aa27.58■■■□□ 2.01
SSU72-201ENST00000291386 ARHGAP6O43182 974 aa27.57■■■□□ 2
SSU72-201ENST00000291386 ALDH1A2O94788 518 aa27.57■■■□□ 2
SSU72-201ENST00000291386 KRT7P08729 469 aa27.57■■■□□ 2
SSU72-201ENST00000291386 GOT1P17174 413 aa27.57■■■□□ 2
SSU72-201ENST00000291386 PRKCHP24723 683 aa27.57■■■□□ 2
SSU72-201ENST00000291386 SSR1P43307 286 aaKnown RBP27.57■■■□□ 2
SSU72-201ENST00000291386 NOP2P46087 812 aaKnown RBP27.57■■■□□ 2
SSU72-201ENST00000291386 ARSEP51690 589 aa27.57■■■□□ 2
SSU72-201ENST00000291386 TAS2R40P59535 323 aa27.57■■■□□ 2
SSU72-201ENST00000291386 ST8SIA6P61647 398 aa27.57■■■□□ 2
SSU72-201ENST00000291386 STARD3Q14849 445 aa27.57■■■□□ 2
SSU72-201ENST00000291386 PPP6R3Q5H9R7 873 aaPredicted RBP27.57■■■□□ 2
SSU72-201ENST00000291386 WDR5BQ86VZ2 330 aa27.57■■■□□ 2
SSU72-201ENST00000291386 LONP2Q86WA8 852 aa27.57■■■□□ 2
SSU72-201ENST00000291386 UMODL1-AS1Q8N2C9 162 aa27.57■■■□□ 2
SSU72-201ENST00000291386 HSPH1Q92598 858 aa27.57■■■□□ 2
SSU72-201ENST00000291386 ACE2Q9BYF1 805 aaPredicted RBP27.57■■■□□ 2
SSU72-201ENST00000291386 RCOR3Q9P2K3 495 aaPredicted RBP27.57■■■□□ 2
SSU72-201ENST00000291386 SUN2Q9UH99 717 aa27.57■■■□□ 2
SSU72-201ENST00000291386 TMEM110-MUSTN1A8MSY1 372 aa27.56■■■□□ 2
SSU72-201ENST00000291386 C7P10643 843 aa27.56■■■□□ 2
SSU72-201ENST00000291386 YBEYP58557 167 aaPredicted RBP27.56■■■□□ 2
SSU72-201ENST00000291386 DMWDQ09019 674 aa27.56■■■□□ 2
SSU72-201ENST00000291386 DPYSQ14117 519 aa27.56■■■□□ 2
SSU72-201ENST00000291386 LRRC38Q5VT99 294 aa27.56■■■□□ 2
SSU72-201ENST00000291386 KIAA1211LQ6NV74 962 aa27.56■■■□□ 2
SSU72-201ENST00000291386 OR7D4Q8NG98 312 aa27.56■■■□□ 2
SSU72-201ENST00000291386 TSC1Q92574 1164 aa27.56■■■□□ 2
SSU72-201ENST00000291386 ARHGEF2Q92974 986 aaKnown RBP27.56■■■□□ 2
SSU72-201ENST00000291386 LACRTQ9GZZ8 138 aa27.56■■■□□ 2
SSU72-201ENST00000291386 PCDH18Q9HCL0 1135 aa27.56■■■□□ 2
SSU72-201ENST00000291386 RAD54BQ9Y620 910 aa27.56■■■□□ 2
SSU72-201ENST00000291386 TCRBV21S2A2A0A5A6 115 aa27.55■■■□□ 2
SSU72-201ENST00000291386 H3BRJ5 948 aa27.55■■■□□ 2
SSU72-201ENST00000291386 RAMP2O60895 175 aa27.55■■■□□ 2
SSU72-201ENST00000291386 LILRB5O75023 590 aa27.55■■■□□ 2
SSU72-201ENST00000291386 EPHX1P07099 455 aa27.55■■■□□ 2
SSU72-201ENST00000291386 ERCC2P18074 760 aa27.55■■■□□ 2
SSU72-201ENST00000291386 NNMTP40261 264 aa27.55■■■□□ 2
SSU72-201ENST00000291386 ARL4AP40617 200 aa27.55■■■□□ 2
SSU72-201ENST00000291386 CAMK2GQ13555 558 aaPredicted RBP27.55■■■□□ 2
SSU72-201ENST00000291386 NOL6Q9H6R4 1146 aaKnown RBP27.55■■■□□ 2
SSU72-201ENST00000291386 ATP13A1Q9HD20 1204 aa27.55■■■□□ 2
SSU72-201ENST00000291386 RAPGEFL1Q9UHV5 662 aa27.55■■■□□ 2
SSU72-201ENST00000291386 VPS51Q9UID3 782 aa27.55■■■□□ 2
SSU72-201ENST00000291386 SLCO3A1Q9UIG8 710 aa27.55■■■□□ 2
SSU72-201ENST00000291386 SALL4Q9UJQ4 1053 aa27.55■■■□□ 2
SSU72-201ENST00000291386 SLC25A13Q9UJS0 675 aa27.55■■■□□ 2
SSU72-201ENST00000291386 HS3ST2Q9Y278 367 aa27.55■■■□□ 2
SSU72-201ENST00000291386 DAPK3O43293 454 aa27.54■■■□□ 2
SSU72-201ENST00000291386 SYNCRIPO60506 623 aaKnown RBP27.54■■■□□ 2
SSU72-201ENST00000291386 BUB1BO60566 1050 aaPredicted RBP27.54■■■□□ 2
SSU72-201ENST00000291386 ZMPSTE24O75844 475 aa27.54■■■□□ 2
SSU72-201ENST00000291386 FNTBP49356 437 aa27.54■■■□□ 2
SSU72-201ENST00000291386 POLD3Q15054 466 aaPredicted RBP27.54■■■□□ 2
SSU72-201ENST00000291386 PDK2Q15119 407 aa27.54■■■□□ 2
SSU72-201ENST00000291386 HNRNPA1L2Q32P51 320 aaKnown RBP27.54■■■□□ 2
SSU72-201ENST00000291386 ATP13A4Q4VNC1 1196 aa27.54■■■□□ 2
SSU72-201ENST00000291386 C11orf63Q6NUN7 778 aa27.54■■■□□ 2
SSU72-201ENST00000291386 KIAA1328Q86T90 577 aa27.54■■■□□ 2
SSU72-201ENST00000291386 MDGA1Q8NFP4 955 aa27.54■■■□□ 2
SSU72-201ENST00000291386 RPL10LQ96L21 214 aaKnown RBP27.54■■■□□ 2
SSU72-201ENST00000291386 CSPG4P5Q96PW8 444 aa27.54■■■□□ 2
SSU72-201ENST00000291386 DESI2Q9BSY9 194 aa27.54■■■□□ 2
SSU72-201ENST00000291386 FBRSQ9HAH7 460 aa27.54■■■□□ 2
SSU72-201ENST00000291386 ALG6Q9Y672 507 aa27.54■■■□□ 2
SSU72-201ENST00000291386 AXIN1O15169 862 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ATP9BO43861 1147 aa27.53■■■□□ 2
SSU72-201ENST00000291386 SNAP91O60641 907 aa27.53■■■□□ 2
SSU72-201ENST00000291386 HLA-EP13747 358 aa27.53■■■□□ 2
SSU72-201ENST00000291386 COMTP21964 271 aa27.53■■■□□ 2
SSU72-201ENST00000291386 IL4RP24394 825 aa27.53■■■□□ 2
SSU72-201ENST00000291386 CNR2P34972 360 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ACVRL1P37023 503 aa27.53■■■□□ 2
SSU72-201ENST00000291386 STK19P49842 368 aaPredicted RBP27.53■■■□□ 2
SSU72-201ENST00000291386 NDST2P52849 883 aa27.53■■■□□ 2
SSU72-201ENST00000291386 CDH6P55285 790 aa27.53■■■□□ 2
SSU72-201ENST00000291386 SLC20A2Q08357 652 aa27.53■■■□□ 2
SSU72-201ENST00000291386 GSE1Q14687 1217 aa27.53■■■□□ 2
SSU72-201ENST00000291386 PARP15Q460N3 678 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ANO7Q6IWH7 933 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ZC3H14Q6PJT7 736 aaKnown RBP27.53■■■□□ 2
SSU72-201ENST00000291386 TPCN2Q8NHX9 752 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ANP32BQ92688 251 aaKnown RBP27.53■■■□□ 2
SSU72-201ENST00000291386 ATOH1Q92858 354 aaPredicted RBP27.53■■■□□ 2
SSU72-201ENST00000291386 SPON2Q9BUD6 331 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms