RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ECI2O75521 394 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 LTBRP36941 435 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 KCNQ1P51787 676 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 TNK2Q07912 1038 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PARP15Q460N3 678 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 KDELC2Q7Z4H8 507 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ANKS1BQ7Z6G8 1248 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 SETD3Q86TU7 594 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 RTP4Q96DX8 246 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ASB16Q96NS5 453 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 QKIQ96PU8 341 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM129AQ9BZQ8 928 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ZNF212Q9UDV6 495 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 BCLAF3A2AJT9 711 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PI4K2BG5E9Z4 385 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 LIASO43766 372 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PMLP29590 882 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MPPE1Q53F39 396 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 TMC5Q6UXY8 1006 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PYROXD2Q8N2H3 581 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC35B2Q8TB61 432 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ITFG1Q8TB96 612 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 NUDT5Q9UKK9 219 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FIS1Q9Y3D6 152 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 TARSL2A2RTX5 802 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM187AA6NFU0 413 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM72CH0Y354 149 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MAP3K13O43283 966 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PRKD1Q15139 912 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ANO4Q32M45 955 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM72AQ5TYM5 149 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM72DQ6L9T8 149 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CHSY1Q86X52 802 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM72BQ86X60 149 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 DENND1CQ8IV53 801 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ZSCAN18Q8TBC5 510 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 P3H4Q92791 437 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ACSF2Q96CM8 615 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 HDAC11Q96DB2 347 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 KLC2Q9H0B6 622 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CLDND1Q9NY35 253 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 NKIRAS1Q9NYS0 192 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CHD5Q8TDI0 1954 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 A0A1B0GVM2 712 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 TCAF2A6NFQ2 919 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MCF2LO15068 1137 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MTSS1O43312 755 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CREB3O43889 395 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CST8O60676 142 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 KRT10P13645 584 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 MX2P20592 715 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FCARP24071 287 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC6A4P31645 630 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 ETFBP38117 255 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 GALNT2Q10471 571 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PDK1Q15118 436 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PDGFRLQ15198 375 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 FBXL22Q6P050 247 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PRELID2Q8N945 189 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 OSCP1Q8WVF1 389 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 EXT2Q93063 718 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 PRICKLE1Q96MT3 831 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC22A12Q96S37 553 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CDX2Q99626 313 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 NR2E1Q9Y466 385 aa8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 BHMG1C9JSJ3 638 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 VIMP08670 466 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 COILP38432 576 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ADCY8P40145 1251 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 NXNQ6DKJ4 435 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 C8orf74Q6P047 294 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 AADACL2Q6P093 401 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 OTOP3Q7RTS5 596 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TSGA13Q96PP4 275 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TMPRSS4Q9NRS4 437 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 THG1LQ9NWX6 298 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 NYNRINQ9P2P1 1898 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ANHXE9PGG2 379 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 PFDN6O15212 129 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 PENKP01210 267 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 KLKB1P03952 638 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TNFRSF8P28908 595 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 YBEYP58557 167 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 PDE1BQ01064 536 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 FCHO2Q0JRZ9 810 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 MMRN1Q13201 1228 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 OASLQ15646 514 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms