RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 IRGMA1A4Y4 181 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CCT8L1PA6NM43 557 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ATMINO43313 823 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KCNQ2O43526 872 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FKBP6O75344 327 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ERCC2P18074 760 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NFKB1P19838 968 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MARSP56192 900 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 IRF8Q02556 426 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ACTN3Q08043 901 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ABRQ12979 859 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CAMK1Q14012 370 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TOMM20Q15388 145 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 PTGISQ16647 500 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZC2HC1CQ53FD0 456 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KCNMB4Q86W47 210 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LGI2Q8N0V4 545 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GALNT4Q8N4A0 578 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 METTL6Q8TCB7 284 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AP3S1Q92572 193 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 QKIQ96PU8 341 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 WDR24Q96S15 920 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 OSMRQ99650 979 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FAM124BQ9H5Z6 455 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 A1CFQ9NQ94 594 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DNAAF2Q9NVR5 837 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KLK14Q9P0G3 267 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GPN3Q9UHW5 284 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SNX6Q9UNH7 406 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZBTB12Q9Y330 459 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 V9GYQ6 96 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GLI2P10070 1586 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZCCHC11Q5TAX3 1644 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 USP32Q8NFA0 1604 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 OR6C75A6NL08 312 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FKTNO75072 461 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ATP9AO75110 1047 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ATG7O95352 703 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LARGE1O95461 756 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF286BP0CG31 522 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CYP2F1P24903 491 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FASP25445 335 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 RPL19P84098 196 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SRSF11Q05519 484 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ACAP2Q15057 778 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ERMARDQ5T6L9 678 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FBXW10Q5XX13 1052 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 THOC7Q6I9Y2 204 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ARMC8Q8IUR7 673 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KBTBD8Q8NFY9 601 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TRPC4APQ8TEL6 797 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SLC22A17Q8WUG5 538 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZFRQ96KR1 1074 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 BTBD9Q96Q07 612 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TCF25Q9BQ70 676 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 PDCD2LQ9BRP1 358 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 BCL2L14Q9BZR8 327 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZFYVE1Q9HBF4 777 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MTRRQ9UBK8 725 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TSC22D4Q9Y3Q8 395 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ASTN2O75129 1339 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LOC100653049A0A140TA62 436 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 A0A1W2PQ67 120 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 H3BQF6 201 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 APOC4-APOC2K7ER74 178 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TEX33O43247 280 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 OR10H2O60403 315 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TPST1O60507 370 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SEC22BO75396 215 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SLC25A12O75746 678 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GLUD1P00367 558 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 APOC2P02655 101 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ACAT1P24752 427 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CASP1P29466 404 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 UGT1A5P35504 534 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ATP6V0D1P61421 351 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MRPS22P82650 360 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GRIK3Q13003 919 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NFIL3Q16649 462 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MZT2AQ6P582 158 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KYAT3Q6YP21 454 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CXXC5Q7LFL8 322 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 PTF1AQ7RTS3 328 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GLT6D1Q7Z4J2 308 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DHFR2Q86XF0 187 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ADHFE1Q8IWW8 467 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CACTIN-AS1Q8N1I8 211 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FNDC5Q8NAU1 212 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 STAG3L4Q8TBR4 150 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SPPL2AQ8TCT8 520 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 EEF1AKMT1Q8WVE0 214 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CD101Q93033 1021 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NACC2Q96BF6 587 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ITCHQ96J02 903 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TBL1YQ9BQ87 522 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KLHL25Q9H0H3 589 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 REEP1Q9H902 201 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CCNB1IP1Q9NPC3 277 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms