RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 C4orf33Q8N1A6 199 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ARHGAP18Q8N392 663 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PNPLA1Q8N8W4 532 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PSMG2Q969U7 264 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 TRIM62Q9BVG3 475 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PLK2Q9NYY3 685 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 TRPM5Q9NZQ8 1165 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 DNMT3LQ9UJW3 386 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 A0A1W2PPM1 405 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ARHGAP42A6NI28 874 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 GOLGA8TH3BQL2 631 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 CHADO15335 359 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 MAFKO60675 156 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 CCNB1P14635 433 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 GLDCP23378 1020 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 OR1E1P30953 314 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 CORO1AP31146 461 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 HCAR3P49019 387 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 EIF3BP55884 814 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ITKQ08881 620 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 KBTBD12Q3ZCT8 623 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 BZW1Q7L1Q6 419 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 HOOK3Q86VS8 718 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ARHGEF2Q92974 986 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ATP2A3Q93084 1043 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 OXNAD1Q96HP4 312 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 CORO1BQ9BR76 489 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 HERC2P3Q9BVR0 1158 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ZBP1Q9H171 429 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 PPANQ9NQ55 473 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
GGPS1-201ENST00000282841 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 INSL6Q9Y581 213 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 TEX264Q9Y6I9 313 aa11.23□□□□□ -0.61
GGPS1-201ENST00000282841 A0A087WUV0 522 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 A0A1W2PRU2 124 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 TCRBV9S1A1TA0A576 114 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ATP9BO43861 1147 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 COQ9O75208 318 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 PMPCBO75439 489 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 MBL2P11226 248 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 MYL4P12829 197 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 GABRR2P28476 465 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 CERCAMQ5T4B2 595 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 GAREM2Q75VX8 874 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 PDZD4Q76G19 769 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 BEND5Q7L4P6 421 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 RTL3Q8N8U3 475 aaKnown RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 BRD8Q9H0E9 1235 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 IPO11Q9UI26 975 aaKnown RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 KIAA1671Q9BY89 1806 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 LILRB3O75022 631 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 TACR2P21452 398 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 SERPINB6P35237 376 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ABCG1P45844 678 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 SLC10A7Q0GE19 358 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 MPP2Q14168 576 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 TEX44Q53QW1 395 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 FAM133BQ5BKY9 247 aaKnown RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 C6orf118Q5T5N4 469 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 LRRC31Q6UY01 552 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ATP6V0D2Q8N8Y2 350 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 DNAAF3Q8N9W5 541 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 IPMKQ8NFU5 416 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 TTLL2Q9BWV7 592 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 ZYG11BQ9C0D3 744 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 CATSPERBQ9H7T0 1116 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 SMYD2Q9NRG4 433 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 RBM22Q9NW64 420 aaKnown RBP eCLIP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 SYBUQ9NX95 663 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 PLXNA3P51805 1871 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 PLXNA4Q9HCM2 1894 aa11.22□□□□□ -0.61
GGPS1-201ENST00000282841 NYNRINQ9P2P1 1898 aaKnown RBP11.22□□□□□ -0.61
GGPS1-201ENST00000282841 GRM6O15303 877 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms