RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 B4GALT3O60512 393 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 PHF2O75151 1096 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 MPIG6BO95866 241 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ZNF853P0CG23 659 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TOP1P11387 765 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 NPPBP16860 134 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 KCNA5P22460 613 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 GPTP24298 496 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 MATR3P43243 847 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-202ENST00000278385 RGS3P49796 1198 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ARFIP2P53365 341 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 RARSP54136 660 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 GBE1Q04446 702 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NOLC1Q14978 699 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-202ENST00000278385 SEC23BQ15437 767 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ADRM1Q16186 407 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 GEN1Q17RS7 908 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ZNF805Q5CZA5 627 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ZBTB41Q5SVQ8 909 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ERMARDQ5T6L9 678 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 SUSD4Q5VX71 490 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 KRT40Q6A162 431 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 KIAA1841Q6NSI8 718 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 INO80CQ6PI98 192 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 SLC30A9Q6PML9 568 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 PET117Q6UWS5 81 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 RGS9BPQ6ZS82 235 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 RNF44Q7L0R7 432 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 MIGA2Q7L4E1 593 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 BMP8AQ7Z5Y6 402 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 LYSMD2Q8IV50 215 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 GALNT4Q8N4A0 578 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-202ENST00000278385 VGLL2Q8N8G2 317 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 GMCL1P1Q8NEA9 526 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 GPR150Q8NGU9 434 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 FIBINQ8TAL6 211 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 FATE1Q969F0 183 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 FOXRED1Q96CU9 486 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 RBM17Q96I25 401 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 APOPT1Q96IL0 206 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 DYDC2Q96IM9 177 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 CCDC114Q96M63 670 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 DMRTA2Q96SC8 542 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NOL10Q9BSC4 688 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 UTP14AQ9BVJ6 771 aaKnown RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 MAGEB5Q9BZ81 275 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 OSBPL6Q9BZF3 934 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TAOK3Q9H2K8 898 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 POFUT1Q9H488 388 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 MSL2Q9HCI7 577 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NRIP3Q9NQ35 241 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TCF7L2Q9NQB0 619 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 SLC35C2Q9NQQ7 365 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 CNNM1Q9NRU3 951 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 HYPKQ9NX55 129 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 TAS2R10Q9NYW0 307 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 PLA2G3Q9NZ20 509 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 DBF4Q9UBU7 674 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 LPAR3Q9UBY5 353 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.81□□□□□ -1.64
CD44-202ENST00000278385 PCDHA3Q9Y5H8 950 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 PCDHA13Q9Y5I0 950 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 NUMBLQ9Y6R0 609 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 DUSP10Q9Y6W6 482 aa4.81□□□□□ -1.64
CD44-202ENST00000278385 IBTKQ9P2D0 1353 aaPredicted RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 PSMD14O00487 310 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 IKBKBO14920 756 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 PGRMC2O15173 223 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 PRICKLE3O43900 615 aaPredicted RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 NTSR2O95665 410 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 ITGB3P05106 788 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 ZNF888P0CJ79 500 aaPredicted RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 PDHBP11177 359 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 UBL4AP11441 157 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 TMEM11P17152 192 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 EPHA8P29322 1005 aaPredicted RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 PSMC2P35998 433 aaKnown RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 MCAMP43121 646 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 HNMTP50135 292 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 STAT5BP51692 787 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 EPHB4P54760 987 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 HDAC4P56524 1084 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 NRG3P56975 720 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 PSMC6P62333 389 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 CCT2P78371 535 aaKnown RBP4.8□□□□□ -1.64
CD44-202ENST00000278385 CCNA1P78396 465 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 SATB1Q01826 763 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 HHEXQ03014 270 aa4.8□□□□□ -1.64
CD44-202ENST00000278385 RPA4Q13156 261 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms