RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 LPPQ93052 612 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 CATSPER2Q96P56 530 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 CASD1Q96PB1 797 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 KCNK16Q96T55 309 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 IMPG2Q9BZV3 1241 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 SDCBP2Q9H190 292 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 RBAKQ9NYW8 714 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 DMTF1Q9Y222 760 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 APOBEC2Q9Y235 224 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 RALGAPA2Q2PPJ7 1873 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 C15orf38-AP3S2A0A0A6YYH1 394 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 BCLAF3A2AJT9 711 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 H0YJX3 145 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 SLC22A2O15244 555 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 GSRP00390 522 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 FOSL2P15408 326 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TPSB2P20231 275 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 IL1R2P27930 398 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ALDH18A1P54886 795 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 MTTPP55157 894 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 WNT7BP56706 349 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 BASP1P80723 227 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 HPCAP84074 193 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 FOLH1Q04609 750 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 APOFQ13790 326 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TPSAB1Q15661 275 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 METTL21CQ5VZV1 264 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 STEAP4Q687X5 459 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ZFP1Q6P2D0 407 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ARPINQ7Z6K5 226 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 MRPL10Q7Z7H8 261 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TICAM1Q8IUC6 712 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 WDR49Q8IV35 697 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 FBXW8Q8N3Y1 598 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 PPM1NQ8N819 430 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 FAM71DQ8N9W8 422 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ELMO3Q96BJ8 720 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 PLAC1Q9HBJ0 212 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 USP29Q9HBJ7 922 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 CNOT11Q9UKZ1 510 aaKnown RBP10.57□□□□□ -0.72
UPF3B-201ENST00000276201 POMPQ9Y244 141 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ANK1P16157 1881 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 ACKR2O00590 384 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 HOXA2O43364 376 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 TFAP2AP05549 437 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 FAM200BP0CF97 657 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 PROZP22891 400 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 CTNNB1P35222 781 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 HARS2P49590 506 aaKnown RBP10.56□□□□□ -0.72
UPF3B-201ENST00000276201 DLG1Q12959 904 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 SURF1Q15526 300 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 TMC7Q7Z402 723 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 RFX6Q8HWS3 928 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 ADCY4Q8NFM4 1077 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 GSDMBQ8TAX9 411 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 MPP4Q96JB8 637 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 RILPQ96NA2 401 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 NIF3L1Q9GZT8 377 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
UPF3B-201ENST00000276201 ZC3H7BQ9UGR2 993 aaKnown RBP10.56□□□□□ -0.72
UPF3B-201ENST00000276201 BCAP29Q9UHQ4 241 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 DTNAQ9Y4J8 743 aa10.56□□□□□ -0.72
UPF3B-201ENST00000276201 ARHGAP10A1A4S6 786 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ZSCAN9O15535 394 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 MED7O43513 233 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SIN3BO75182 1162 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 GLRA3O75311 464 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 TNFAIP8O95379 198 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SERPINE1P05121 402 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SETSIPP0DME0 302 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 FGF3P11487 239 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 KRT3P12035 628 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ITGAXP20702 1163 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 TGM2P21980 687 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 PEX2P28328 305 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 BMPR1AP36894 532 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 FAXCQ5TGI0 409 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SLC27A1Q6PCB7 646 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 AGMOQ6ZNB7 445 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 CAND1Q86VP6 1230 aaKnown RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 TRPC4APQ8TEL6 797 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ZNF778Q96MU6 729 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 GAS2L1Q99501 681 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 MECRQ9BV79 373 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms