RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 H3BMQ9 156 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 SOCS2O14508 198 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 GABRB2P47870 512 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 LSM3P62310 102 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 IFNEQ86WN2 208 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 CLIP3Q96DZ5 547 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 COG8Q96MW5 612 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 TARS2Q9BW92 718 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 KLC2Q9H0B6 622 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 C3orf70A6NLC5 250 aaPredicted RBP13.08□□□□□ -0.31
HERC6-202ENST00000273960 ESRRBO95718 433 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 GSRP00390 522 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 CALB1P05937 261 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 L1CAMP32004 1257 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 NOVP48745 357 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 BCAR1P56945 870 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 MYL6P60660 151 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.31
HERC6-202ENST00000273960 PRPSAP1Q14558 356 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 KCNJ11Q14654 390 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 ZIK1Q3SY52 487 aaPredicted RBP13.08□□□□□ -0.31
HERC6-202ENST00000273960 MTERF2Q49AM1 385 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 CBR4Q8N4T8 237 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 TBC1D15Q8TC07 691 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 OSBPL11Q9BXB4 747 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 IGSF9Q9P2J2 1179 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 EGFL7Q9UHF1 273 aa13.08□□□□□ -0.31
HERC6-202ENST00000273960 PSMD11O00231 422 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 FAM102AQ5T9C2 384 aaPredicted RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 CCDC167Q9P0B6 97 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 COPG2Q9UBF2 871 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 FETUBQ9UGM5 382 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 USP18Q9UMW8 372 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 APOC4-APOC2K7ER74 178 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 APOC2P02655 101 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 KRT7P08729 469 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 ALDH4A1P30038 563 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 GRIA3P42263 894 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 RGS7P49802 495 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 TPTEP56180 551 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 TMEM102Q8N9M5 508 aaPredicted RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 ZMAT2Q96NC0 199 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 PIF1Q9H611 641 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 PNPLA3Q9NST1 481 aa13.08□□□□□ -0.32
HERC6-202ENST00000273960 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
HERC6-202ENST00000273960 RGSL1A5PLK6 1076 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 HTRA2O43464 458 aaPredicted RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 SLC26A4O43511 780 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MGAT1P26572 445 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ARCQ7LC44 396 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 OMDQ99983 421 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 A0A1W2PQ67 120 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 E7ENX8 843 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 NAGLUP54802 743 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 RAB39AQ14964 217 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 ZACNQ401N2 412 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ENOSF1Q7L5Y1 443 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 LYSMD3Q7Z3D4 306 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 MFSD14AQ96MC6 490 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 FRMD8Q9BZ67 464 aaPredicted RBP13.07□□□□□ -0.32
HERC6-202ENST00000273960 EHD1Q9H4M9 534 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 THSD7AQ9UPZ6 1657 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 AP3B1O00203 1094 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 PIGNO95427 931 aa13.07□□□□□ -0.32
HERC6-202ENST00000273960 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms