RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 FAM98BQ52LJ0 330 aaKnown RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ABCG4Q9H172 646 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 KCTD10Q9H3F6 313 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 M0QX08 132 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SSX5O60225 188 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 B3GALNT1O75752 331 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CCNB2O95067 398 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CYP2C18P33260 490 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 AP3S2P59780 193 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 IKBKEQ14164 716 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 KYNUQ16719 465 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 WASHC2DQ5SRD0 308 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 LHFPL3Q86UP9 236 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 GALNT4Q8N4A0 578 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 NEUROD4Q9HD90 331 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TBX20Q9UMR3 447 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 PLOD2O00469 737 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 THEGLP0DJG4 465 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 NRG3P56975 720 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CUL2Q13617 745 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 INSCQ1MX18 579 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CCDC58Q4VC31 144 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ATG16L2Q8NAA4 619 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SPACA7Q96KW9 195 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 OR14I1A6ND48 311 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 HSMCR30P0CW71 290 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TGFB2P61812 414 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TRPV5Q9NQA5 729 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 NFKB1P19838 968 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CBX5P45973 191 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ZDHHC4Q9NPG8 344 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 NECTIN3Q9NQS3 549 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 CXCL11O14625 94 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ZCCHC18P0CG32 403 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF23P17027 643 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ITGA7Q13683 1181 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SSX2Q16385 188 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 C16orf86Q6ZW13 317 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 TMEM132CQ8N3T6 1108 aa13.47□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
PRDM16-201ENST00000270722 PIK3CBP42338 1070 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 NFIXQ14938 502 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 PRPF39Q86UA1 669 aaKnown RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF410Q86VK4 478 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 AADATQ8N5Z0 425 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 AKAP1Q92667 903 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 CYLDQ9NQC7 956 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 UBP1Q9NZI7 540 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 GSTK1Q9Y2Q3 226 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 PPM1BO75688 479 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 MPZL3Q6UWV2 235 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 DPY30Q9C005 99 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 CYP27B1O15528 508 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 TMEM253P0C7T8 217 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 AKR1A1P14550 325 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 MAGEA4P43358 317 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 EID3Q8N140 333 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 SMURF2Q9HAU4 748 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 SNX12Q9UMY4 172 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 GSAPA4D1B5 854 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ATP9AO75110 1047 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 CHKAP35790 457 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 CCR3P51677 355 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 OTUD4Q01804 1114 aaKnown RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 MSANTD1Q6ZTZ1 278 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ARHGEF19Q8IW93 802 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 FAM20CQ8IXL6 584 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 C1orf131Q8NDD1 294 aaKnown RBP13.46□□□□□ -0.25
PRDM16-201ENST00000270722 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 FAR1Q8WVX9 515 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 UGT2B28Q9BY64 529 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 TMEM117Q9H0C3 514 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF451Q9Y4E5 1061 aa13.46□□□□□ -0.25
PRDM16-201ENST00000270722 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms