RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SOCS7O14512 581 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 HNRNPRO43390 633 aaKnown RBP28.05■■■□□ 2.08
CBX4-201ENST00000269397 INSRRP14616 1297 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 RGS2P41220 211 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 ADGRE1Q14246 886 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 ZNF423Q2M1K9 1284 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 DLK2Q6UY11 383 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SLC26A9Q7LBE3 791 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.05■■■□□ 2.08
CBX4-201ENST00000269397 PKP2Q99959 881 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 PREBQ9HCU5 417 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 PDGFCQ9NRA1 345 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 A0A1B0GTW7 788 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 TRPA1O75762 1119 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 TOMM70O94826 608 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 USP46P62068 366 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 MYLK3Q32MK0 819 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 ZFP28Q8NHY6 868 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SERPINI1Q99574 410 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 NAT9Q9BTE0 207 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SPATC1LQ9H0A9 340 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 RIMS3Q9UJD0 308 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SSC5DA1L4H1 1573 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 HACD1B0YJ81 288 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 HBP1O60381 514 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 CYLC2Q14093 348 aaPredicted RBP28.05■■■□□ 2.08
CBX4-201ENST00000269397 EML3Q32P44 896 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SPANXN3Q5MJ09 141 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 RIOX2Q8IUF8 465 aa28.05■■■□□ 2.08
CBX4-201ENST00000269397 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.05■■■□□ 2.08
CBX4-201ENST00000269397 EIF2B3Q9NR50 452 aaKnown RBP28.05■■■□□ 2.08
CBX4-201ENST00000269397 KLHL8Q9P2G9 620 aaPredicted RBP28.05■■■□□ 2.08
CBX4-201ENST00000269397 SULT1E1P49888 294 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 PIGGQ5H8A4 983 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 CERCAMQ5T4B2 595 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 C16orf89Q6UX73 402 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 ZMAT2Q96NC0 199 aaKnown RBP28.04■■■□□ 2.08
CBX4-201ENST00000269397 UNKQ9C0B0 810 aaKnown RBP28.04■■■□□ 2.08
CBX4-201ENST00000269397 SMARCAD1Q9H4L7 1026 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 Q9H521 79 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 TUBGCP4Q9UGJ1 667 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 SLC39A10Q9ULF5 831 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 KPNA7A9QM74 516 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 MATN2O00339 956 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 PIGNO95427 931 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 MAGEA12P43365 314 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 ARL13AQ5H913 290 aaPredicted RBP28.04■■■□□ 2.08
CBX4-201ENST00000269397 METTL21CQ5VZV1 264 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 DEFB106AQ8N104 65 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 RNF139Q8WU17 664 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 C18orf25Q96B23 403 aaPredicted RBP28.04■■■□□ 2.08
CBX4-201ENST00000269397 EPB41L1Q9H4G0 881 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 TASP1Q9H6P5 420 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.04■■■□□ 2.083e-8■■■■□ 24.6
CBX4-201ENST00000269397 FZD10Q9ULW2 581 aa28.04■■■□□ 2.08
CBX4-201ENST00000269397 MCM3APO60318 1980 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 TPH1P17752 444 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 LMO2P25791 158 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 GRIA4P48058 902 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 SEL1L3Q68CR1 1132 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 KBTBD7Q8WVZ9 684 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 NDUFA13Q9P0J0 144 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 HSFX1Q9UBD0 423 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 ZDHHC2Q9UIJ5 367 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 VANGL2Q9ULK5 521 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 PRPF19Q9UMS4 504 aaKnown RBP28.03■■■□□ 2.08
CBX4-201ENST00000269397 PHF24Q9UPV7 400 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 CITO14578 2027 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 SETSIPP0DME0 302 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 AVPR1AP37288 418 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 RPL26P61254 145 aaKnown RBP28.03■■■□□ 2.08
CBX4-201ENST00000269397 Q3C1V9 767 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 DCAF6Q58WW2 860 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 OLFML2BQ68BL8 750 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 PTAR1Q7Z6K3 402 aaPredicted RBP28.03■■■□□ 2.08
CBX4-201ENST00000269397 ZSCAN18Q8TBC5 510 aaPredicted RBP28.03■■■□□ 2.08
CBX4-201ENST00000269397 NLRP7Q8WX94 980 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 TMA16Q96EY4 203 aaKnown RBP28.03■■■□□ 2.08
CBX4-201ENST00000269397 KLHL32Q96NJ5 620 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 PTTG2Q9NZH5 202 aa28.03■■■□□ 2.08
CBX4-201ENST00000269397 ZCWPW2A0A1B0GU75 182 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 PHGDHO43175 533 aaKnown RBP28.02■■■□□ 2.08
CBX4-201ENST00000269397 NUMBP49757 651 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 NAGLUP54802 743 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 PDK1Q15118 436 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 SMYD5Q6GMV2 418 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 B3GNT6Q6ZMB0 384 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 CLEC14AQ86T13 490 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 LENG1Q96BZ8 264 aaPredicted RBP28.02■■■□□ 2.08
CBX4-201ENST00000269397 LRRC40Q9H9A6 602 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 OXSMQ9NWU1 459 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 GINS2Q9Y248 185 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 TMEM114B3SHH9 223 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 HDAC3O15379 428 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 TXNP10599 105 aaKnown RBP28.02■■■□□ 2.08
CBX4-201ENST00000269397 NPAS2Q99743 824 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 ACE2Q9BYF1 805 aaPredicted RBP28.02■■■□□ 2.08
CBX4-201ENST00000269397 WDR41Q9HAD4 459 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 CHRAC1Q9NRG0 131 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 IARS2Q9NSE4 1012 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms