RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 HCFC2Q9Y5Z7 792 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 CHD5Q8TDI0 1954 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 RASA4BC9J798 803 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 GFRA2O00451 464 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 RASA4O43374 803 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 RAMP2O60895 175 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CLDN11O75508 207 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 PAPLNO95428 1278 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 JCHAINP01591 159 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CKMP06732 381 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 IRF1P10914 325 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CCNB1P14635 433 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 OR1E1P30953 314 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CCR2P41597 374 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 ZXDBP98169 803 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 GABPB1Q06547 395 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 ZBTB17Q13105 803 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 KYNUQ16719 465 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 FNBP1LQ5T0N5 605 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 TTC39BQ5VTQ0 682 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 CHST9Q7L1S5 443 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 FAM217AQ8IXS0 508 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 MAML1Q92585 1016 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 HMCESQ96FZ2 354 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 SLC46A2Q9BY10 475 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 PRKD2Q9BZL6 878 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 NKX2-4Q9H2Z4 354 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 HCFC1R1Q9NWW0 138 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 ZNF510Q9Y2H8 683 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 NYNRINQ9P2P1 1898 aaKnown RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 NOTCH4Q99466 2003 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 E7EVH7 732 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 H3BQF6 201 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 NRG2O14511 850 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 PER2O15055 1255 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 ZBTB24O43167 697 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 CACNG3O60359 315 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 RHOP08100 348 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 ABHD2P08910 425 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 ZNF844Q08AG5 666 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 PDIA2Q13087 525 aaKnown RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 POLD3Q15054 466 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 MSS51Q4VC12 460 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 HTR3DQ70Z44 454 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CIR1Q86X95 450 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 PRICKLE1Q96MT3 831 aaPredicted RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 SERPINB12Q96P63 405 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 TMEM109Q9BVC6 243 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 GBA3Q9H227 469 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 CERS4Q9HA82 394 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 XAB2Q9HCS7 855 aaKnown RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 ZMYM5Q9UJ78 669 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
SS18-201ENST00000269137 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
SS18-201ENST00000269137 MYO9BQ13459 2157 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 MOSPD3O75425 235 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 GJA1P17302 382 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 PSMB4P28070 264 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 CD68P34810 354 aaPredicted RBP14.42□□□□□ -0.1
SS18-201ENST00000269137 MAGEA3P43357 314 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 RPS24P62847 133 aaKnown RBP14.42□□□□□ -0.1
SS18-201ENST00000269137 SARNPP82979 210 aaKnown RBP14.42□□□□□ -0.1
SS18-201ENST00000269137 DUSP6Q16828 381 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 ANO4Q32M45 955 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 ADGRD2Q7Z7M1 963 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 CAND1Q86VP6 1230 aaKnown RBP14.42□□□□□ -0.1
SS18-201ENST00000269137 KLHDC8BQ8IXV7 354 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 ZBED8Q8IZ13 594 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 CFAP52Q8N1V2 620 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 CNTD1Q8N815 330 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 ARNTL2Q8WYA1 636 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 ZNF707Q96C28 371 aaPredicted RBP14.42□□□□□ -0.1
SS18-201ENST00000269137 C9orf72Q96LT7 481 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 AGAP3Q96P47 875 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 MAGEH1Q9H213 219 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 TASP1Q9H6P5 420 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 TLE6Q9H808 572 aa14.42□□□□□ -0.1
SS18-201ENST00000269137 A0A1B0GVM2 712 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 TCAF2A6NFQ2 919 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 ERI2A8K979 691 aaKnown RBP14.41□□□□□ -0.1
SS18-201ENST00000269137 ACSL3O95573 720 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 PEX11BO96011 259 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 MLNP12872 115 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 TSHRP16473 764 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 IFNAR2P48551 515 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 IFFO1Q0D2I5 559 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 SERINC3Q13530 473 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 HNRNPDQ14103 355 aaKnown RBP14.41□□□□□ -0.1
SS18-201ENST00000269137 FASTKD3Q14CZ7 662 aaKnown RBP14.41□□□□□ -0.1
SS18-201ENST00000269137 ARHGAP15Q53QZ3 475 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 CEP85LQ5SZL2 805 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 UBAP2Q5T6F2 1119 aaKnown RBP14.41□□□□□ -0.1
SS18-201ENST00000269137 CROCCP2Q86T23 111 aa14.41□□□□□ -0.1
SS18-201ENST00000269137 RBM23Q86U06 439 aaKnown RBP14.41□□□□□ -0.1
SS18-201ENST00000269137 GOLGA6L1Q8N7Z2 621 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms