RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TRIM13O60858 407 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 BEST1O76090 585 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 SERPINB8P50452 374 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 ZNF460Q14592 562 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 GRTP1Q5TC63 336 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 APOBEC3FQ8IUX4 373 aaKnown RBP17.25■□□□□ 0.35
RTN1-201ENST00000267484 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
RTN1-201ENST00000267484 RNF169Q8NCN4 708 aa17.25■□□□□ 0.35
RTN1-201ENST00000267484 M0QYT0 321 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 DNAJA2O60884 412 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 MYL4P12829 197 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 SPRP35270 261 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 LIMK2P53671 638 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 FLOT2Q14254 428 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 CNGA3Q16281 694 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 CCDC153Q494R4 210 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 OGFRL1Q5TC84 451 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 LILRA2Q8N149 483 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 MPP4Q96JB8 637 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 TASP1Q9H6P5 420 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ELP3Q9H9T3 547 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ANLNQ9NQW6 1124 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 C20orf96Q9NUD7 363 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 A0A1B0GTW7 788 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 TMEM233B4DJY2 109 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ZBTB7AO95365 584 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 PIGNO95427 931 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 SETSIPP0DME0 302 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 GLDCP23378 1020 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ACAT1P24752 427 aaKnown RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 NAGLUP54802 743 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 LSAMPQ13449 338 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 PDCD2Q16342 344 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 PIGZQ86VD9 579 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ANKRD52Q8NB46 1076 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 B4GALNT2Q8NHY0 566 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 PIP4K2CQ8TBX8 421 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 KBTBD7Q8WVZ9 684 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 NFKBIZQ9BYH8 718 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 GRIP2Q9C0E4 1043 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ZBTB24O43167 697 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 CEACAM7Q14002 265 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 KCTD2Q14681 263 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 SLC5A9Q2M3M2 681 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ARL13AQ5H913 290 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 RBM44Q6ZP01 1051 aaKnown RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 MOB2Q70IA6 237 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 HAPLN3Q96S86 360 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 FAM49AQ9H0Q0 323 aaPredicted RBP17.24■□□□□ 0.35
RTN1-201ENST00000267484 VCX3AQ9NNX9 186 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 ZDHHC2Q9UIJ5 367 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 PSMD13Q9UNM6 376 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 FIS1Q9Y3D6 152 aa17.24■□□□□ 0.35
RTN1-201ENST00000267484 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 HACD1B0YJ81 288 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 CASQ2O14958 399 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 CRTAMO95727 393 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 GNL1P36915 607 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 MATKP42679 507 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 GRIA4P48058 902 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 BCAT1P54687 386 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 DYNC1I2Q13409 638 aaKnown RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 METTL25Q8N6Q8 603 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 BHLHE22Q8NFJ8 381 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 ZSCAN18Q8TBC5 510 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 SCYL1Q96KG9 808 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 ZNF487B1APH4 448 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 IGFBP6P24592 240 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 PTPN3P26045 913 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 TTLL12Q14166 644 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 GRM3Q14832 879 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 ARHGAP22Q7Z5H3 698 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 EZH1Q92800 747 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 TMA16Q96EY4 203 aaKnown RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 LRGUKQ96M69 825 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 ILKAPQ9H0C8 392 aaPredicted RBP17.23■□□□□ 0.35
RTN1-201ENST00000267484 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 STK39Q9UEW8 545 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 COMMD3-BMI1R4GMX3 469 aa17.23■□□□□ 0.35
RTN1-201ENST00000267484 I6L893 689 aaPredicted RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 TFAP2AP05549 437 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 PDK1Q15118 436 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 MAP3K21Q5TCX8 1036 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 KYQ8NBH2 561 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 VPS39Q96JC1 886 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 NPAS2Q99743 824 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 OMDQ99983 421 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 ACE2Q9BYF1 805 aaPredicted RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms