RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PAN2Q504Q3 1202 aaKnown RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 SLC41A1Q8IVJ1 513 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 MFN1Q8IWA4 741 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 BHLHE22Q8NFJ8 381 aaPredicted RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 SLC45A3Q96JT2 553 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 EPAS1Q99814 870 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 PCDHAC1Q9H158 963 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 SNX25Q9H3E2 840 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 NMRAL1Q9HBL8 299 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 NUDT5Q9UKK9 219 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
SQLE-201ENST00000265896 MTF2Q9Y483 593 aaPredicted RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
SQLE-201ENST00000265896 G3V2L1 256 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 H3BRB1 525 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 FKBP6O75344 327 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 IL1BP01584 269 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 JCHAINP01591 159 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 ERCC2P18074 760 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 PIK3R1P27986 724 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 GRIA4P48058 902 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 ZBTB17Q13105 803 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 FLOT2Q14254 428 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 PITRM1Q5JRX3 1037 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 SPATA24Q86W54 205 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 GRIN3AQ8TCU5 1115 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 URGCPQ8TCY9 931 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 KBTBD7Q8WVZ9 684 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 PRPF18Q99633 342 aaKnown RBP17.14■□□□□ 0.33
SQLE-201ENST00000265896 CDH19Q9H159 772 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
SQLE-201ENST00000265896 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 NFKB1P19838 968 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 AFF1P51825 1210 aaKnown RBP17.14■□□□□ 0.33
SQLE-201ENST00000265896 MPP1Q00013 466 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 CNGA3Q16281 694 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 NOMO2Q5JPE7 1267 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 ARHGAP36Q6ZRI8 547 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 TMC7Q7Z402 723 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 DSELQ8IZU8 1212 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 ACTRT2Q8TDY3 377 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 ZFP42Q96MM3 310 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 NDNQ99608 321 aa17.14■□□□□ 0.33
SQLE-201ENST00000265896 DDX43Q9NXZ2 648 aaKnown RBP17.14■□□□□ 0.33
SQLE-201ENST00000265896 CCL22O00626 93 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 DNAJA2O60884 412 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 CALRP27797 417 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ARHGAP1Q07960 439 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 RALGDSQ12967 914 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 USP10Q14694 798 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 FAM91A1Q658Y4 838 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 CYP2R1Q6VVX0 501 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 DCUN1D1Q96GG9 259 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 NR1H4Q96RI1 486 aaPredicted RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 GORASP1Q9BQQ3 440 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ETAA1Q9NY74 926 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ADA2Q9NZK5 511 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 RUVBL2Q9Y230 463 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 ANK1P16157 1881 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 MAGEA6P43360 314 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 BST2Q10589 180 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 OTUD1Q5VV17 481 aaPredicted RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 PGM2L1Q6PCE3 622 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 RBM44Q6ZP01 1051 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 LILRA2Q8N149 483 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.13■□□□□ 0.33
SQLE-201ENST00000265896 MPP4Q96JB8 637 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 OLFM3Q96PB7 478 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 FRMD8Q9BZ67 464 aaPredicted RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
SQLE-201ENST00000265896 FZD10Q9ULW2 581 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 USP3Q9Y6I4 520 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ATP6AP2A0A1C7CYW4 349 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 C9IYK1 514 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 DPYSL4O14531 572 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 AURKAO14965 403 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ATP6AP2O75787 350 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 RANBP1P43487 201 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 GJA9P57773 515 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 PRAMEF19Q5SWL8 479 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 ACAD11Q709F0 780 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 GPRIN1Q7Z2K8 1008 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 KCNMB4Q86W47 210 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 OSTM1Q86WC4 334 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 TRAPPC9Q96Q05 1148 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 SLC39A3Q9BRY0 314 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
SQLE-201ENST00000265896 C1orf21Q9H246 121 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms