RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 IL17RCQ8NAC3 791 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 EXD1Q8NHP7 514 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 SEC14L1Q92503 715 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 ACDQ96AP0 544 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 MYEOVQ96EZ4 313 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 PRICKLE1Q96MT3 831 aaPredicted RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 PHOX2BQ99453 314 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 MED4Q9NPJ6 270 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 PIGVQ9NUD9 493 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 ZSCAN32Q9NX65 697 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 LILRB5O75023 590 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 GJB6O95452 261 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 F9P00740 461 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 OAS2P29728 719 aaKnown RBP13.02□□□□□ -0.33
SGCE-201ENST00000265735 HOXC13P31276 330 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 FNTAP49354 379 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 CXCR3P49682 368 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 NRLP54845 237 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 TAS2R40P59535 323 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 NME3Q13232 169 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 CCDC137Q6PK04 289 aaKnown RBP13.02□□□□□ -0.33
SGCE-201ENST00000265735 KIAA0907Q7Z7F0 614 aaPredicted RBP13.02□□□□□ -0.33
SGCE-201ENST00000265735 CCDC50Q8IVM0 306 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 FNIP1Q8TF40 1166 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 TBCBQ99426 244 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 ERP44Q9BS26 406 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
SGCE-201ENST00000265735 SLC12A6Q9UHW9 1150 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 MMP17Q9ULZ9 603 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 PCDHGA2Q9Y5H1 932 aa13.02□□□□□ -0.33
SGCE-201ENST00000265735 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 MOCS2O96007 188 aaPredicted RBP13.01□□□□□ -0.33
SGCE-201ENST00000265735 RARAP10276 462 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 HLA-FP30511 346 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 TIE1P35590 1138 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 COILP38432 576 aaPredicted RBP13.01□□□□□ -0.33
SGCE-201ENST00000265735 SULT1E1P49888 294 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 DMC1Q14565 340 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 SIX1Q15475 284 aaPredicted RBP13.01□□□□□ -0.33
SGCE-201ENST00000265735 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 ALS2CLQ60I27 953 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 JAMLQ86YT9 394 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 MREGQ8N565 214 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 ALLCQ8N6M5 410 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 EMC1Q8N766 993 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
SGCE-201ENST00000265735 JOSD2Q8TAC2 188 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 FAM122AQ96E09 287 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 LMLNQ96KR4 655 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 CFAP57Q96MR6 1250 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 LRRC19Q9H756 370 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 ANLNQ9NQW6 1124 aa13.01□□□□□ -0.33
SGCE-201ENST00000265735 POLR3BQ9NW08 1133 aaPredicted RBP13.01□□□□□ -0.33
SGCE-201ENST00000265735 EML5Q05BV3 1969 aa13□□□□□ -0.33
SGCE-201ENST00000265735 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
SGCE-201ENST00000265735 GOLGA6BA6NDN3 693 aa13□□□□□ -0.33
SGCE-201ENST00000265735 I6L893 689 aaPredicted RBP13□□□□□ -0.33
SGCE-201ENST00000265735 SGK1O00141 431 aa13□□□□□ -0.33
SGCE-201ENST00000265735 DAPK3O43293 454 aa13□□□□□ -0.33
SGCE-201ENST00000265735 TBL1XO60907 577 aa13□□□□□ -0.33
SGCE-201ENST00000265735 ADAM23O75077 832 aa13□□□□□ -0.33
SGCE-201ENST00000265735 HNRNPLP14866 589 aaKnown RBP eCLIP13□□□□□ -0.33
SGCE-201ENST00000265735 TACR2P21452 398 aa13□□□□□ -0.33
SGCE-201ENST00000265735 PSMA2P25787 234 aa13□□□□□ -0.33
SGCE-201ENST00000265735 RFC1P35251 1148 aaPredicted RBP13□□□□□ -0.33
SGCE-201ENST00000265735 DRG2P55039 364 aaKnown RBP13□□□□□ -0.33
SGCE-201ENST00000265735 COPS2P61201 443 aa13□□□□□ -0.33
SGCE-201ENST00000265735 RPS24P62847 133 aaKnown RBP13□□□□□ -0.33
SGCE-201ENST00000265735 DEUP1Q05D60 604 aa13□□□□□ -0.33
SGCE-201ENST00000265735 DMWDQ09019 674 aa13□□□□□ -0.33
SGCE-201ENST00000265735 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
SGCE-201ENST00000265735 ACAP1Q15027 740 aa13□□□□□ -0.33
SGCE-201ENST00000265735 CRY1Q16526 586 aa13□□□□□ -0.33
SGCE-201ENST00000265735 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
SGCE-201ENST00000265735 RAP1GAP2Q684P5 730 aa13□□□□□ -0.33
SGCE-201ENST00000265735 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
SGCE-201ENST00000265735 ZNF513Q8N8E2 541 aaPredicted RBP13□□□□□ -0.33
SGCE-201ENST00000265735 TXNDC5Q8NBS9 432 aaKnown RBP13□□□□□ -0.33
SGCE-201ENST00000265735 HJURPQ8NCD3 748 aaPredicted RBP13□□□□□ -0.33
SGCE-201ENST00000265735 FIBINQ8TAL6 211 aa13□□□□□ -0.33
SGCE-201ENST00000265735 FAM71BQ8TC56 605 aa13□□□□□ -0.33
SGCE-201ENST00000265735 RXFP2Q8WXD0 754 aa13□□□□□ -0.33
SGCE-201ENST00000265735 SEMA4AQ9H3S1 761 aa13□□□□□ -0.33
SGCE-201ENST00000265735 WDCPQ9H6R7 721 aa13□□□□□ -0.33
SGCE-201ENST00000265735 COX16Q9P0S2 106 aa13□□□□□ -0.33
SGCE-201ENST00000265735 FEZ2Q9UHY8 353 aaPredicted RBP13□□□□□ -0.33
SGCE-201ENST00000265735 SLC8A2Q9UPR5 921 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms