RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 DCKP27707 260 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 C4orf22Q6V702 233 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 ATG14Q6ZNE5 492 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SNX32Q86XE0 403 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 TERB1Q8NA31 727 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 ADAMTS16Q8TE57 1224 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 TANKQ92844 425 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 NPLQ9BXD5 320 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 PARVBQ9HBI1 364 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 SACM1LQ9NTJ5 587 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 PAK5Q9P286 719 aa13.39□□□□□ -0.27
NUP54-201ENST00000264883 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
NUP54-201ENST00000264883 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 LRCH4O75427 683 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 KRT3P12035 628 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 FGFR3P22607 806 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 ROR1Q01973 937 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PRKCEQ02156 737 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 TFDP2Q14188 446 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 EMC2Q15006 297 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 ZNF786Q8N393 782 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
NUP54-201ENST00000264883 HPS1Q92902 700 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 CTRCQ99895 268 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 DAPK2Q9UIK4 370 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 SLC30A1Q9Y6M5 507 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 WDR81Q562E7 1941 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 HMX2A2RU54 273 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 K7ERI5 159 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 SNAP91O60641 907 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 CSPG5O95196 566 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 CD1EP15812 388 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PTPN2P17706 415 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PTPRAP18433 802 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 GRK2P25098 689 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PIK3R1P27986 724 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 TTKP33981 857 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 SERPINB9P50453 376 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 NRLP54845 237 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 SOX10P56693 466 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 WNT7BP56706 349 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PRAMEP78395 509 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 GNA12Q03113 381 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 STXBP5Q5T5C0 1151 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 N4BP2L1Q5TBK1 243 aaPredicted RBP13.38□□□□□ -0.27
NUP54-201ENST00000264883 TMEM26Q6ZUK4 368 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
NUP54-201ENST00000264883 ZBTB46Q86UZ6 589 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
NUP54-201ENST00000264883 ATP6V1E2Q96A05 226 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 TRPV6Q9H1D0 765 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 VPS51Q9UID3 782 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
NUP54-201ENST00000264883 EMCNQ9ULC0 261 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 ERVK-11Q9UQG0 969 aa13.38□□□□□ -0.27
NUP54-201ENST00000264883 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 CAPN15O75808 1086 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 ERBB2P04626 1255 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 ENO3P13929 434 aaPredicted RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 TRAF2Q12933 501 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 PPM1LQ5SGD2 360 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 SIX6OS1Q8N1H7 587 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
NUP54-201ENST00000264883 KCTD6Q8NC69 237 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 ZSCAN18Q8TBC5 510 aaPredicted RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 SLC29A1Q99808 456 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 KLHL25Q9H0H3 589 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 PORCNQ9H237 461 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 RAVER2Q9HCJ3 691 aaKnown RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 CISHQ9NSE2 258 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 RIC8BQ9NVN3 520 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 TIMM22Q9Y584 194 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 SNX9Q9Y5X1 595 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
NUP54-201ENST00000264883 ACOT8O14734 319 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 APOEP02649 317 aa13.37□□□□□ -0.27
NUP54-201ENST00000264883 KCNA2P16389 499 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms