RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 FAM237BA0A1B0GVD1 139 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 GPR15P49685 360 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 SLC25A3Q00325 362 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ZIK1Q3SY52 487 aaPredicted RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 EARS2Q5JPH6 523 aaKnown RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 IRGCQ6NXR0 463 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TLR10Q9BXR5 811 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ATAD3AQ9NVI7 634 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 AHSPQ9NZD4 102 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 DCCP43146 1447 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 DDX3XO00571 662 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL5A3-201ENST00000264828 RBL1P28749 1068 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 EPHX2P34913 555 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 TGFB2P61812 414 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 CRADDP78560 199 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 SYT12Q8IV01 421 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 ATP13A1Q9HD20 1204 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 URODP06132 367 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 PTSQ03393 145 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 SAMD4BQ5PRF9 694 aaKnown RBP18.28■□□□□ 0.52
COL5A3-201ENST00000264828 CENPIQ92674 756 aaPredicted RBP18.28■□□□□ 0.52
COL5A3-201ENST00000264828 TRIM63Q969Q1 353 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 VAV3Q9UKW4 847 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 SNCAIPQ9Y6H5 919 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 RGS14O43566 566 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 ACOX1Q15067 660 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 RNASE11Q8TAA1 199 aaKnown RBP18.28■□□□□ 0.52
COL5A3-201ENST00000264828 BCL2L14Q9BZR8 327 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 TOR4AQ9NXH8 423 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 POLR1DQ9Y2S0 133 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 LYVE1Q9Y5Y7 322 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 MST1RQ04912 1400 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 PSMD11O00231 422 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 OR6B1O95007 311 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 ATP4AP20648 1035 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 BACE1P56817 501 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 LSM3P62310 102 aaKnown RBP18.28■□□□□ 0.52
COL5A3-201ENST00000264828 BPIFB6Q8NFQ5 453 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 RAB21Q9UL25 225 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 STARD13Q9Y3M8 1113 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 A0A087X1B8 175 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 COX7A2P14406 83 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 DPYSL3Q14195 570 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 NDUFA5Q16718 116 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 CDC73Q6P1J9 531 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 CACUL1Q86Y37 369 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF671Q8TAW3 534 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 SMPD4Q9NXE4 827 aa18.28■□□□□ 0.52
COL5A3-201ENST00000264828 KCNH1O95259 989 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 C8orf59Q8N0T1 100 aaPredicted RBP18.27■□□□□ 0.52
COL5A3-201ENST00000264828 PARP8Q8N3A8 854 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 STON1Q9Y6Q2 735 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 A0A087WXM4 84 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 ENO2P09104 434 aaPredicted RBP18.27■□□□□ 0.52
COL5A3-201ENST00000264828 HPCAL1P37235 193 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF280DQ6N043 979 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 KCNT2Q6UVM3 1135 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 CYP20A1Q6UW02 462 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 ZCCHC9Q8N567 271 aaKnown RBP18.27■□□□□ 0.52
COL5A3-201ENST00000264828 SLITRK2Q9H156 845 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 YBX3P16989 372 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF7P17097 686 aaPredicted RBP18.27■□□□□ 0.52
COL5A3-201ENST00000264828 S100A3P33764 101 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 GSTM5P46439 218 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 PRKAA2P54646 552 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 B3GNT6Q6ZMB0 384 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 DEFB106AQ8N104 65 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 PROX1Q92786 737 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 PLA2G4CQ9UP65 541 aa18.27■□□□□ 0.52
COL5A3-201ENST00000264828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 FAM86B1E9PN63 330 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 BANF1O75531 89 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 ACADMP11310 421 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 CCT3P49368 545 aaKnown RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 FRG1Q14331 258 aaKnown RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 KIAA0408Q6ZU52 694 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 RSPH9Q9H1X1 276 aaPredicted RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 MMADHCQ9H3L0 296 aaPredicted RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 ANAPC2Q9UJX6 822 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 VPS4BO75351 444 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 MIPP30301 263 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 RPL14P50914 215 aaKnown RBP18.27■□□□□ 0.51
COL5A3-201ENST00000264828 CYP2W1Q8TAV3 490 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 ALG9Q9H6U8 611 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 SAR1AQ9NR31 198 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 FAM50BQ9Y247 325 aa18.27■□□□□ 0.51
COL5A3-201ENST00000264828 BCLAF3A2AJT9 711 aaKnown RBP18.26■□□□□ 0.51
COL5A3-201ENST00000264828 CRATP43155 626 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 POLD2P49005 469 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 CHN2P52757 468 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 PGM5Q15124 567 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 LGI2Q8N0V4 545 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 POLE3Q9NRF9 147 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
COL5A3-201ENST00000264828 A0A0U1RQJ8 604 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms