RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 CHID1Q9BWS9 393 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 ANAPC2Q9UJX6 822 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 TSPAN16Q9UKR8 245 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 A0A0J9YVX5 310 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 TMEM247A6NEH6 219 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 MED26O95402 600 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 CAPN1P07384 714 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 ADSSP30520 456 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 NAMPTP43490 491 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 TPTEP56180 551 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 MXD4Q14582 209 aaPredicted RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 FAM98BQ52LJ0 330 aaKnown RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 RHBDF2Q6PJF5 856 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 TTC30AQ86WT1 665 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 ZFP28Q8NHY6 868 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 FIG4Q92562 907 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 EPS8L2Q9H6S3 715 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 TMEM216Q9P0N5 145 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 GMEB1Q9Y692 573 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 NCF1BA6NI72 391 aaPredicted RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 NCF1CA8MVU1 366 aaPredicted RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 SNAP91O60641 907 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 SERPINI2O75830 405 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 NCF1P14598 390 aaPredicted RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 TCF4P15884 667 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 PSMB4P28070 264 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 DPYSQ14117 519 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 ZNF846Q147U1 533 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 PLEKHG4Q58EX7 1191 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 CCDC117Q8IWD4 279 aaPredicted RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 ZDHHC14Q8IZN3 488 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 KCTD4Q8WVF5 259 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 PTCD3Q96EY7 689 aaKnown RBP15.34■□□□□ 0.05
CASC3-201ENST00000264645 ARMC7Q9H6L4 198 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 ADAMTS6Q9UKP5 1117 aa15.34■□□□□ 0.05
CASC3-201ENST00000264645 KCNU1A8MYU2 1149 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 ITM2AO43736 263 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 LRCH4O75427 683 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 AMHP03971 560 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 KLRC2P26717 231 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 CMPK2Q5EBM0 449 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 DENND1AQ8TEH3 1009 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 PCDHAC1Q9H158 963 aa15.33■□□□□ 0.05
CASC3-201ENST00000264645 MICAL2O94851 1124 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 TRUB2O95900 331 aaKnown RBP15.33■□□□□ 0.04
CASC3-201ENST00000264645 C2P06681 752 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 CSH1P0DML2 217 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 CSH2P0DML3 217 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 ITGAXP20702 1163 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 SEPHS1P49903 392 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 VAC14Q08AM6 782 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 ACAD9Q9H845 621 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.04
CASC3-201ENST00000264645 ASTN2O75129 1339 aaPredicted RBP15.33■□□□□ 0.04
CASC3-201ENST00000264645 C3P01024 1663 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 STX16-NPEPL1H3BU86 382 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 TOR1BO14657 336 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 SNPHO15079 494 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 ZSCAN9O15535 394 aaPredicted RBP15.33■□□□□ 0.04
CASC3-201ENST00000264645 MYLK3Q32MK0 819 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 METTL21CQ5VZV1 264 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 SLCO6A1Q86UG4 719 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 PHTF2Q8N3S3 785 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 UBR7Q8N806 425 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 TBCBQ99426 244 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 RIC8BQ9NVN3 520 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.04
CASC3-201ENST00000264645 MTSS1O43312 755 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ICAM1P05362 532 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 CXCL8P10145 99 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ADAM17P78536 824 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 TXNRD3NBQ6F5E7 133 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 DNAJC14Q6Y2X3 702 aaPredicted RBP15.32■□□□□ 0.04
CASC3-201ENST00000264645 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.32■□□□□ 0.04
CASC3-201ENST00000264645 LIMD1Q9UGP4 676 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 CLUHO75153 1309 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ERI2A8K979 691 aaKnown RBP15.32■□□□□ 0.04
CASC3-201ENST00000264645 RBP1P09455 135 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 TFEBP19484 476 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 STT3AP46977 705 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ST13P50502 369 aaKnown RBP15.32■□□□□ 0.04
CASC3-201ENST00000264645 TRAF3Q13114 568 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 KLHL35Q6PF15 583 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 PTF1AQ7RTS3 328 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 FBXO27Q8NI29 283 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 RBBP8Q99708 897 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ATXN3LQ9H3M9 355 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 SP110Q9HB58 689 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 XPR1Q9UBH6 696 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 DKK3Q9UBP4 350 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 TOP3BO95985 862 aaKnown RBP15.32■□□□□ 0.04
CASC3-201ENST00000264645 TLR1Q15399 786 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 SPANXN2Q5MJ10 180 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 TMEM198Q66K66 360 aa15.32■□□□□ 0.04
CASC3-201ENST00000264645 ZNF470Q6ECI4 717 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms