RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
HERC6-201ENST00000264346 BANPQ8N9N5 519 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 DCAKDQ8WVC6 231 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 KCTD4Q8WVF5 259 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 LRRC39Q96DD0 335 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 TAGLN3Q9UI15 199 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 KCNH4Q9UQ05 1017 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 PLLPQ9Y342 182 aa12.81□□□□□ -0.36
HERC6-201ENST00000264346 PIGNO95427 931 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 SCNN1BP51168 640 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 ATAD1Q8NBU5 361 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 ICA1LQ8NDH6 482 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 MUC3BQ9H195 1237 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 GPAMQ9HCL2 828 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 SNX15Q9NRS6 342 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 NKX1-2Q9UD57 310 aaPredicted RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 AAR2Q9Y312 384 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 TYW5A2RUC4 315 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 SOAT2O75908 522 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 CCNB1P14635 433 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 EPHA3P29320 983 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 PKNOX1P55347 436 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 ZNF792Q3KQV3 632 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 MARC1Q5VT66 337 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 CCNJLQ8IV13 435 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 MOCOSQ96EN8 888 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 FCRL2Q96LA5 508 aaPredicted RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 RREB1Q92766 1687 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 SDK1Q7Z5N4 2213 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 BCLAF3A2AJT9 711 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 ERI2A8K979 691 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 HNRNPCL1O60812 293 aaKnown RBP12.8□□□□□ -0.36
HERC6-201ENST00000264346 TRIM13O60858 407 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 PFDN1O60925 122 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 ZNF460Q14592 562 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 SEL1L3Q68CR1 1132 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 CDHR3Q6ZTQ4 885 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 TMEM110Q86TL2 294 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 LINC00523Q86TU6 105 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 NUP93Q8N1F7 819 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 STK32AQ8WU08 396 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 SLC4A5Q9BY07 1137 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 RNPEPL1Q9HAU8 725 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 HACD3Q9P035 362 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 AURKCQ9UQB9 309 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 LTBP3Q9NS15 1303 aa12.8□□□□□ -0.36
HERC6-201ENST00000264346 C9IYK1 514 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 PTPN7P35236 360 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 VHLP40337 213 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 PBX3P40426 434 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 GJA9P57773 515 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 IL1RL1Q01638 556 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 RFWD3Q6PCD5 774 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 RNF180Q86T96 592 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 PAAF1Q9BRP4 392 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TCF7L2Q9NQB0 619 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 ANLNQ9NQW6 1124 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 CDYLQ9Y232 598 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 SLC4A7Q9Y6M7 1214 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 ATP6AP2A0A1C7CYW4 349 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 HACD1B0YJ81 288 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 SOCS7O14512 581 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 SNX2O60749 519 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 ATP6AP2O75787 350 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 OR1E1P30953 314 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 GEMP55040 296 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TBX4P57082 545 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 ENPEPQ07075 957 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 SLC10A2Q12908 348 aaPredicted RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 MAPRE1Q15691 268 aaKnown RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 FAM83EQ2M2I3 478 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TLDC1Q6P9B6 456 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 SNRNP27Q8WVK2 155 aaKnown RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TMEM216Q9P0N5 145 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TTC24A2A3L6 582 aaPredicted RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 CBX4O00257 560 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 NDUFS3O75489 264 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 C2P06681 752 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 AFF1P51825 1210 aaKnown RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 GRIK3Q13003 919 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 TIGD5Q53EQ6 642 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 LCA5Q86VQ0 697 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 FGD4Q96M96 766 aa12.79□□□□□ -0.36
HERC6-201ENST00000264346 FAM96AQ9H5X1 160 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms