RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 HIRAP54198 1017 aaPredicted RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 CCL23P55773 120 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 BOP1Q14137 746 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 PGS1Q32NB8 556 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ERAP2Q6P179 960 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 TTC33Q6PID6 262 aaPredicted RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 CASP10Q92851 521 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ZNF558Q96NG5 402 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 TMEM237Q96Q45 408 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ZYG11BQ9C0D3 744 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 TTYH3Q9C0H2 523 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PARVBQ9HBI1 364 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PARP4Q9UKK3 1724 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 FKBP6O75344 327 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 CBX6O95503 412 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SLC2A4P14672 509 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 FMO4P31512 558 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SFSWAPQ12872 951 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 STARD3Q14849 445 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 FOXR1Q6PIV2 292 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 RASGEF1CQ8N431 466 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 TMEM159Q96B96 161 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 CNBD2Q96M20 576 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 BTBD10Q9BSF8 475 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 C2orf49Q9BVC5 232 aaPredicted RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 MYLK2Q9H1R3 596 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PCDH18Q9HCL0 1135 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PCDHA11Q9Y5I1 949 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 DDX3YO15523 660 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 XYLBO75191 536 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PIAS1O75925 651 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ATP6V1B1P15313 513 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SERPINB10P48595 397 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 CDC16Q13042 620 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SDHAF4Q5VUM1 108 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 YTHDF3Q7Z739 585 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 OSGEPL1Q9H4B0 414 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ACSS3Q9H6R3 686 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 ERVK-5Q9HDB9 667 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 MRPL17Q9NRX2 175 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 SCN3BQ9NY72 215 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 HLA-DPA1P20036 260 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 TP53BP2Q13625 1128 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 TPGS1Q6ZTW0 290 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 EBNA1BP2Q99848 306 aaKnown RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 POMKQ9H5K3 350 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 SCAMP3O14828 347 aaKnown RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 DCXO43602 365 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 PIGNO95427 931 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 JAM2P57087 298 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 TUSC3Q13454 348 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 LRRC49Q8IUZ0 686 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 METTL6Q8TCB7 284 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 DPF3Q92784 378 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 MBOAT7Q96N66 472 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 SH3GL1Q99961 368 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 PDZD7Q9H5P4 517 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 SLC27A5Q9Y2P5 690 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 PCDH8O95206 1070 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 GPC1P35052 558 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 CNTN1Q12860 1018 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 PHACTR4Q8IZ21 702 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 OR56A4Q8NGH8 313 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 HSD3B7Q9H2F3 369 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 CATSPERZQ9NTU4 200 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 ZNF214Q9UL59 606 aaPredicted RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 GPR25O00155 361 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 BUD23O43709 281 aaKnown RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 SNX3O60493 162 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 PCNAP12004 261 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 CYP2A7P20853 494 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 SLC44A2Q8IWA5 706 aaPredicted RBP14.22□□□□□ -0.13
CDH3-201ENST00000264012 PDP2Q9P2J9 529 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 MORF4L1Q9UBU8 362 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 COG5Q9UP83 839 aa14.22□□□□□ -0.13
CDH3-201ENST00000264012 CNTNAP1P78357 1384 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 A0A087X1B8 175 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 TMEM114B3SHH9 223 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 ALOX15BO15296 676 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 CPSF4O95639 269 aaKnown RBP14.21□□□□□ -0.13
CDH3-201ENST00000264012 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
CDH3-201ENST00000264012 FASTKQ14296 549 aaKnown RBP14.21□□□□□ -0.13
CDH3-201ENST00000264012 DDR2Q16832 855 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 MIER2Q8N344 545 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDH3-201ENST00000264012 DMAC2Q9NW81 257 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDH3-201ENST00000264012 ATRNL1Q5VV63 1379 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 TREHO43280 583 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 USP1O94782 785 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms