RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MBLAC2Q68D91 279 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 NCBP2-AS2Q69YL0 99 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 SLC9A4Q6AI14 798 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 CCDC50Q8IVM0 306 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 ARHGEF2Q92974 986 aaKnown RBP17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 TTC17Q96AE7 1141 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 MAK16Q9BXY0 300 aaKnown RBP17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 PRDM16Q9HAZ2 1276 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 VPS28Q9UK41 221 aa17.04■□□□□ 0.32
CHCHD3-201ENST00000262570 ANTXRLA6NF34 631 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 STK25O00506 426 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 KRT10P13645 584 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 POLR2EP19388 210 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PTPN7P35236 360 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 ETFBP38117 255 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 KIR2DL1P43626 348 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PAFAH1B3Q15102 231 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 LLGL1Q15334 1064 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PARP15Q460N3 678 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 DGKKQ5KSL6 1271 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 ARHGAP12Q8IWW6 846 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PJA1Q8NG27 643 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 OR7D4Q8NG98 312 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 CELF6Q96J87 481 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 PSMB7Q99436 277 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 ACE2Q9BYF1 805 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 CIPCQ9C0C6 399 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 SLC39A8Q9C0K1 460 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 EPHX3Q9H6B9 360 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 RBM12Q9NTZ6 932 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 HCN2Q9UL51 889 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
CHCHD3-201ENST00000262570 RASA4BC9J798 803 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 ENC1O14682 589 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 RASA4O43374 803 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 SERPINB6P35237 376 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 ACVRL1P37023 503 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 NUMBP49757 651 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 GNG11P61952 73 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 ADCY2Q08462 1091 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 ZNF211Q13398 564 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 EMC10Q5UCC4 262 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 AADACL2Q6P093 401 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 RFX6Q8HWS3 928 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 SYNPOQ8N3V7 929 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 DCAF4L2Q8NA75 395 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 FLCNQ8NFG4 579 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 CCDC26Q8TAB7 109 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 ACDQ96AP0 544 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 HMCESQ96FZ2 354 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 C2orf49Q9BVC5 232 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 OSBPL8Q9BZF1 889 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 CARD9Q9H257 536 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 LMAN1LQ9HAT1 526 aa17.02■□□□□ 0.32
CHCHD3-201ENST00000262570 NCAM2O15394 837 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 ATP5BP06576 529 aaKnown RBP17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 DLDP09622 509 aaKnown RBP17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 ZFXP17010 805 aaPredicted RBP17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 CETN2P41208 172 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 SULT2A1Q06520 285 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 TFDP2Q14188 446 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 LRRC32Q14392 662 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 KAZNQ674X7 775 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 CWF19L1Q69YN2 538 aaKnown RBP17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 IL31Q6EBC2 164 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 TP53INP2Q8IXH6 220 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 NETO2Q8NC67 525 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 UCMAQ8WVF2 138 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 SORCS1Q8WY21 1168 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 CLDN23Q96B33 292 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 WDR24Q96S15 920 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 SPON2Q9BUD6 331 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 ATP13A1Q9HD20 1204 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 SIT1Q9Y3P8 196 aa17.02■□□□□ 0.31
CHCHD3-201ENST00000262570 KCNK3O14649 394 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 APOL1O14791 398 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 MFSD11O43934 449 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 SNAP91O60641 907 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 CST8O60676 142 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 RNF40O75150 1001 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 ZMPSTE24O75844 475 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 ASLP04424 464 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.313e-8■■■■□ 21.4
CHCHD3-201ENST00000262570 CTSOP43234 321 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 PAPOLAP51003 745 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 SEC13P55735 322 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 ECT2LQ008S8 904 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 GBE1Q04446 702 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 SERINC3Q13530 473 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 PTPRNQ16849 979 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 HEMGNQ9BXL5 484 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 THAP10Q9P2Z0 257 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms