RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 CELF3Q5SZQ8 465 aaKnown RBP18.34■□□□□ 0.53
TRAF4-201ENST00000262395 AMIGO2Q86SJ2 522 aa18.34■□□□□ 0.53
TRAF4-201ENST00000262395 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
TRAF4-201ENST00000262395 NMRAL1Q9HBL8 299 aa18.34■□□□□ 0.53
TRAF4-201ENST00000262395 KLHL8Q9P2G9 620 aaPredicted RBP18.34■□□□□ 0.53
TRAF4-201ENST00000262395 TMEM233B4DJY2 109 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 INSRRP14616 1297 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 GLDCP23378 1020 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 LMO2P25791 158 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 PCSK6P29122 969 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 NAGLUP54802 743 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 DBN1Q16643 649 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 CCDC153Q494R4 210 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 DCAF6Q58WW2 860 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 RARS2Q5T160 578 aaKnown RBP18.33■□□□□ 0.53
TRAF4-201ENST00000262395 CYS1Q717R9 158 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 SNX31Q8N9S9 440 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 URGCPQ8TCY9 931 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 SCYL1Q96KG9 808 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 CPNE1Q99829 537 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 FERMT1Q9BQL6 677 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 FAM96AQ9H5X1 160 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 ASB7Q9H672 318 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 HSFX1Q9UBD0 423 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 TUBGCP4Q9UGJ1 667 aa18.33■□□□□ 0.53
TRAF4-201ENST00000262395 THRAP10827 490 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 MCF2P10911 925 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 PIM1P11309 404 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 MLNP12872 115 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 FGFR3P22607 806 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 SPRP35270 261 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 SULT1E1P49888 294 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 SERPINB8P50452 374 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 CYLC2Q14093 348 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ADGRE1Q14246 886 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 INSCQ1MX18 579 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ARL13AQ5H913 290 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 POTEAQ6S8J7 498 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 DEFB106AQ8N104 65 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 MARVELD2Q8N4S9 558 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 NLRP7Q8WX94 980 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 KLHL32Q96NJ5 620 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ILKAPQ9H0C8 392 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 CHRAC1Q9NRG0 131 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 IARS2Q9NSE4 1012 aaKnown RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 RHBDL2Q9NX52 303 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 GALNT8Q9NY28 637 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ZDHHC2Q9UIJ5 367 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 HEMK1Q9Y5R4 338 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 CSPG5O95196 566 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 EDNRBP24530 442 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 GRIA4P48058 902 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF460Q14592 562 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 GRTP1Q5TC63 336 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 ZMAT2Q96NC0 199 aaKnown RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 C6orf203Q9P0P8 240 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-201ENST00000262395 USP3Q9Y6I4 520 aa18.33■□□□□ 0.52
TRAF4-201ENST00000262395 RGSL1A5PLK6 1076 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 MRPL1Q9BYD6 325 aaKnown RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 SUDS3Q9H7L9 328 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 C20orf96Q9NUD7 363 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 RIMS3Q9UJD0 308 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 H3BSA7 217 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-201ENST00000262395 SGF29Q96ES7 293 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 DTNBP1Q96EV8 351 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 OMDQ99983 421 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 WDR41Q9HAD4 459 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 KIAA1257Q9ULG3 409 aa18.32■□□□□ 0.52
TRAF4-201ENST00000262395 DENRO43583 198 aaKnown RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 C22orf31O95567 290 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 TGFB3P10600 412 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 PTPN1P18031 435 aaKnown RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 RGS2P41220 211 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 PTPN9P43378 593 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 LIMK2P53671 638 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 TNFAIP2Q03169 654 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 ART3Q13508 389 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 SEL1L3Q68CR1 1132 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 LBX2Q6XYB7 198 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 B3GNT6Q6ZMB0 384 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 PCDH20Q8N6Y1 951 aaKnown RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 CCNYL1Q8N7R7 359 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 CEP70Q8NHQ1 597 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 GRIN3AQ8TCU5 1115 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 KLRG1Q96E93 195 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 SERPINI1Q99574 410 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms