RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SLC39A8Q9C0K1 460 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 HPS4Q9NQG7 708 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 A0A1B0GVM2 712 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 ANKRD33BA6NCL7 494 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 TCAF2A6NFQ2 919 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 DFFAO00273 331 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 CDH4P55283 916 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 CKAP4Q07065 602 aaKnown RBP28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 FCHO2Q0JRZ9 810 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 DHCR24Q15392 516 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 MPPE1Q53F39 396 aa28.18■■■□□ 2.1
SMARCD3-201ENST00000262188 A0A0D9SEW6 157 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 WASH4PA8MWX3 477 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 TRIM24O15164 1050 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ERLIN1O75477 346 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 PSMC3P17980 439 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 GDI1P31150 447 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 NRLP54845 237 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 NOMO1Q15155 1222 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 CXorf57Q6NSI4 855 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 YAF2Q8IY57 180 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 NOA1Q8NC60 698 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 MAGOHBQ96A72 148 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 LGMNQ99538 433 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 GTSE1Q9NYZ3 720 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ATXN2Q99700 1313 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 H0Y626 953 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 SLC9A3R1O14745 358 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ASGR2P07307 311 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ZFXP17010 805 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ACVRL1P37023 503 aa28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 EIF3EP60228 445 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-201ENST00000262188 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 ANHXE9PGG2 379 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 LIASO43766 372 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 CLDN11O75508 207 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 ECI2O75521 394 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 TYRP14679 529 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 ZNF177Q13360 481 aaPredicted RBP28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 AAK1Q2M2I8 961 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 ZNF572Q7Z3I7 529 aaPredicted RBP28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 PRUNE1Q86TP1 453 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 MFN1Q8IWA4 741 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 OR7D4Q8NG98 312 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 HMCESQ96FZ2 354 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 KRT12Q99456 494 aa28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 THG1LQ9NWX6 298 aaKnown RBP28.16■■■□□ 2.1
SMARCD3-201ENST00000262188 TYW5A2RUC4 315 aaKnown RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 LUC7L3O95232 432 aaKnown RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 NAIF1Q69YI7 327 aaPredicted RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 ASTLQ6HA08 431 aaPredicted RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 OTUB2Q96DC9 234 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 OLFM3Q96PB7 478 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 PARD6BQ9BYG5 372 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 LRRC19Q9H756 370 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 NYNRINQ9P2P1 1898 aaKnown RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 KIF26AQ9ULI4 1882 aaPredicted RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CTAGE15A4D2H0 777 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 PENKP01210 267 aaPredicted RBP28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CYBBP04839 570 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CTAGE8P0CG41 777 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CDH18Q13634 790 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 MTSS1LQ765P7 747 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CHST9Q7L1S5 443 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CTAGE6Q86UF2 777 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 C12orf40Q86WS4 652 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 CTAGE4Q8IX94 777 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 SLC35B2Q8TB61 432 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 MAIP1Q8WWC4 291 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 ITFG2Q969R8 447 aa28.15■■■□□ 2.1
SMARCD3-201ENST00000262188 GOLGA6L10A0A0M3HER8 536 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 H7C0C1 242 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 PHF2O75151 1096 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 RBP3P10745 1247 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 MZF1P28698 734 aaPredicted RBP28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 ATP5OP48047 213 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 PAPOLAP51003 745 aaKnown RBP28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 TTC39BQ5VTQ0 682 aaPredicted RBP28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 AFMIDQ63HM1 303 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 UMODL1-AS1Q8N2C9 162 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 CEP112Q8N8E3 955 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 E2F7Q96AV8 911 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 TMEM121Q9BTD3 319 aa28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 TRMT61BQ9BVS5 477 aaKnown RBP28.14■■■□□ 2.1
SMARCD3-201ENST00000262188 RASA4BC9J798 803 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 RASA4O43374 803 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 RAMP2O60895 175 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 RHOCP08134 193 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 GLDCP23378 1020 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 SERPINB6P35237 376 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 CCNG2Q16589 344 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 HSP90B2PQ58FF3 399 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 RNF219Q5W0B1 726 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 ZNF354CQ86Y25 554 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 CCNYQ8ND76 341 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 HINFPQ9BQA5 517 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 ECT2Q9H8V3 914 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 KCNK12Q9HB15 430 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 MCF2LO15068 1137 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 ADH5P11766 374 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms