RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LGMNQ99538 433 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SPON2Q9BUD6 331 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 POMKQ9H5K3 350 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 GM2AP17900 193 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 SPIRE1Q08AE8 756 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 SPATA6LQ8N4H0 392 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 CERKQ8TCT0 537 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 OSCP1Q8WVF1 389 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 OSBPL6Q9BZF3 934 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 RAD21L1Q9H4I0 556 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 HNRNPLP14866 589 aaKnown RBP eCLIP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 TNFSF9P41273 254 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 IDH3AP50213 366 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 RAD23AP54725 363 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 UBE3AQ05086 875 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 DAW1Q8N136 415 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 KCTD4Q8WVF5 259 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 TCF12Q99081 682 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 ATXN3LQ9H3M9 355 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 CYP3A43Q9HB55 503 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 RIC8BQ9NVN3 520 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 ASNA1O43681 348 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 ANXA9O76027 345 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 CYP1A1P04798 512 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 C2P06681 752 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 PRKAA2P54646 552 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 FRG1Q14331 258 aaKnown RBP16.49■□□□□ 0.23
SREBF1-201ENST00000261646 NIPA1Q7RTP0 329 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 RORBQ92753 470 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 RNF19AQ9NV58 838 aa16.49■□□□□ 0.23
SREBF1-201ENST00000261646 NCF1BA6NI72 391 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 NCF1CA8MVU1 366 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 NCF1P14598 390 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CD151P48509 253 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF470Q6ECI4 717 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 TAS2R42Q7RTR8 314 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 PDSS2Q86YH6 399 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 OR9Q1Q8NGQ5 310 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CELF6Q96J87 481 aaKnown RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CXorf21Q9HAI6 301 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CSH1P0DML2 217 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CSH2P0DML3 217 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 TSPAN8P19075 237 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ARPP19P56211 112 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 TRIM25Q14258 630 aaKnown RBP16.48■□□□□ 0.23
SREBF1-201ENST00000261646 PLCL1Q15111 1095 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 LDLRAP1Q5SW96 308 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF781Q8N8C0 355 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 LPGAT1Q92604 370 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CD274Q9NZQ7 290 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 TMEM216Q9P0N5 145 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 FETUBQ9UGM5 382 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 SLC8A2Q9UPR5 921 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 WNT10BO00744 389 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 NDUFS3O75489 264 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CCNG1P51959 295 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 HPCAP84074 193 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ATP6AP1LQ52LC2 224 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 BTBD8Q5XKL5 378 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 GK5Q6ZS86 529 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CPXM1Q96SM3 734 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CNGB3Q9NQW8 809 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CLUHO75153 1309 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 PGK2P07205 417 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 CDH17Q12864 832 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 NAB1Q13506 487 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 ADGRE1Q14246 886 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 NAT8LQ8N9F0 302 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 SLC35B2Q8TB61 432 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 SKA1Q96BD8 255 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 PARVBQ9HBI1 364 aa16.48■□□□□ 0.23
SREBF1-201ENST00000261646 MAGEB16A2A368 324 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 ERI2A8K979 691 aaKnown RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 MATN2O00339 956 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CFHP08603 1231 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CRABP2P29373 138 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 NUMBP49757 651 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 TTLL4Q14679 1199 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 KYAT1Q16773 422 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 DENND1AQ8TEH3 1009 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 LENG9Q96B70 501 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms