RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PAK5Q9P286 719 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 NYNRINQ9P2P1 1898 aaKnown RBP17.91■□□□□ 0.46
SRSF1-201ENST00000258962 TCRBV7S3A2A0A539 114 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 SLC12A8A0AV02 714 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 NDC80O14777 642 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 OPA1O60313 960 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 F11P03951 625 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 OAS2P29728 719 aaKnown RBP17.91■□□□□ 0.46
SRSF1-201ENST00000258962 HTR7P34969 479 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 CBX1P83916 185 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 CYP4F8P98187 520 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 GAD2Q05329 585 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 PDK1Q15118 436 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 TANGO2Q6ICL3 276 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 LRIG3Q6UXM1 1119 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 PCGF5Q86SE9 256 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 ZNF683Q8IZ20 524 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 CCDC110Q8TBZ0 833 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 E2F7Q96AV8 911 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 ELSPBP1Q96BH3 223 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 TBC1D31Q96DN5 1066 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 C1orf74Q96LT6 269 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 FOXP3Q9BZS1 431 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 FBXL21Q9UKT6 434 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 DUSP12Q9UNI6 340 aa17.91■□□□□ 0.46
SRSF1-201ENST00000258962 C5orf60A6NFR6 353 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 E9PAM4 449 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 GPR37L1O60883 481 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 GCATO75600 419 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 TMEM63AO94886 807 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 APOEP02649 317 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 HMBSP08397 361 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 SRFP11831 508 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 DDX6P26196 483 aaKnown RBP eCLIP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 MLLT6P55198 1093 aaPredicted RBP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 MS4A13Q5J8X5 152 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 STXBP5Q5T5C0 1151 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 HEATR6Q6AI08 1181 aaKnown RBP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 RWDD4Q6NW29 188 aaKnown RBP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 POTEHQ6S545 545 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 HOOK3Q86VS8 718 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 ARID3BQ8IVW6 561 aaPredicted RBP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 OR2W6PQ8NHA6 318 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 HTR3CQ8WXA8 447 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 TSPYL1Q9H0U9 437 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 CDC42EP4Q9H3Q1 356 aaKnown RBP17.9■□□□□ 0.46
SRSF1-201ENST00000258962 TRPV4Q9HBA0 871 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 TRPM5Q9NZQ8 1165 aa17.9■□□□□ 0.46
SRSF1-201ENST00000258962 FAM86C2PA6NEL3 165 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 TMEM221A6NGB7 291 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 SOBPA7XYQ1 873 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 M0R296 226 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 PPP1R12AO14974 1030 aaPredicted RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 RIPK2O43353 540 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 NARSO43776 548 aaKnown RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 AVPR1AP37288 418 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 VIPR2P41587 438 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 PPP3CCP48454 512 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 BASP1P80723 227 aaKnown RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 RING1Q06587 406 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 GALNT2Q10471 571 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 KCNJ11Q14654 390 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 TRMT10CQ7L0Y3 403 aaKnown RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 TMEM150AQ86TG1 271 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 RELL1Q8IUW5 271 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 ATP6V0D2Q8N8Y2 350 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 P2RY11Q96G91 374 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 CDK5RAP1Q96SZ6 601 aaKnown RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 SLC46A2Q9BY10 475 aa17.89■□□□□ 0.45
SRSF1-201ENST00000258962 HBS1LQ9Y450 684 aaKnown RBP17.89■□□□□ 0.45
SRSF1-201ENST00000258962 FGF10O15520 208 aaPredicted RBP17.88■□□□□ 0.45
SRSF1-201ENST00000258962 COCHO43405 550 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 NUDT17P0C025 328 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 SERPINB6P35237 376 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 ATP5C1P36542 298 aaKnown RBP17.88■□□□□ 0.45
SRSF1-201ENST00000258962 TUBP50607 506 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 AP1B1Q10567 949 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 HECTD3Q5T447 861 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 TXNDC8Q6A555 127 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 KLHDC10Q6PID8 442 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 ARHGAP12Q8IWW6 846 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 BTN2A3PQ96KV6 586 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 RBM15Q96T37 977 aaKnown RBP eCLIP17.88■□□□□ 0.458e-13■■■□□ 14.6
SRSF1-201ENST00000258962 TRPC7Q9HCX4 862 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 RAB6BQ9NRW1 208 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 NINJ2Q9NZG7 142 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 DNMT3LQ9UJW3 386 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 MYO18AQ92614 2054 aaKnown RBP17.88■□□□□ 0.45
SRSF1-201ENST00000258962 MUC3AQ02505 3323 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 A0A0A0MRY4 1105 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 GOLGA8MH3BSY2 632 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 RNF103O00237 685 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 METTL18O95568 372 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 FCARP24071 287 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 ACTN2P35609 894 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 MAGEA6P43360 314 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 IRAK1P51617 712 aa17.88■□□□□ 0.45
SRSF1-201ENST00000258962 KPNA1P52294 538 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms